KEGG T09612: RHM62

Actimicrobium sp. CCC2.4: RHM62_17345

Entry

RHM62_17345       CDS       T09612

Name

(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

actb Actimicrobium sp. CCC2.4

Brite

KEGG Orthology (KO) [BR:actb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:actb03009]
    RHM62_17345
Enzymes [BR:actb01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     RHM62_17345
Ribosome biogenesis [BR:actb03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    RHM62_17345

SSDB

Motif

Pfam:

Methyltr_RsmB-F RsmF-B_ferredox Ubie_methyltran Methyltransf_31 Methyltransf_25 MTS Methyltransf_33 GCD14 Methyltr_RsmF_N Cons_hypoth95 Methyltransf_12 Methyltransf_24 FtsJ TRM5-TYW2_MTfase Methyltransf_15

Other DBs

NCBI-ProteinID:

WPX31980

Position

complement(3773092..3774354)

AA seq 420 aa
MRLPPAIVTSTEEILRDILRFTGPADGTLSRFFREHPKLGSRERGAIAEGIYGVLRNKSV
YTSFSESGNGPTMRRMTLLGLAGAVGADALGGLSEEETAWLEHTMQIDRTLLPALMRSNL
PQWLFDKLVAREGEEGALALAAALNEPAPLDLRVNVIKASREEVMAALAEAPILAEVTPF
SPVGLRVLKKPALQNLPLFRDGLIEVQDEGSQLLAQIVGAKRGEMVVDFCAGAGGKTLAL
GAAMRNTGRLYAFDISEKRLAKLKPRLARSGLSNVHPVQIAHENDAKIKRLAGKIDRVLV
DAPCSGLGTLRRNPDVKWRQTLVGVAELNVKQTSILSGAARMVKTGGRLVYATCSLLDEE
NEDIVSAFLATHADFVLVPMKDVLAEQRVDLEMQDYLKLTPSQHQTDGFFAAVFERIKVG

NT seq 1263 nt +upstreamnt +downstreamnt
atgagattgcctcccgcaattgttaccagtaccgaagaaatcctgcgcgatatcctgcgc
ttcaccggccctgccgatggcacactttcgcgcttttttcgcgaacatccgaagctcggt
tcccgggagcgtggcgccattgcggaagggatctacggcgtgttgcgtaacaaatcggtt
tataccagcttctccgagtccggtaatggtccgacgatgcggcgcatgactttgttaggc
ctggccggggcagtcggtgccgatgcgcttggtggactgagcgaagaggaaacggcgtgg
cttgagcatacgatgcaaattgaccgcaccctgctaccggccttaatgcgttcgaacttg
ccgcagtggttgttcgataaactcgtggcgcgcgaaggggaagagggtgcgcttgcgcta
gcggcagcattgaacgagccggcaccgctggacttgcgcgtcaacgtgatcaaggcatcg
cgcgaagaagtcatggcggcgctggctgaagcaccaatccttgctgaagtaacaccgttt
tcgccagtcgggctgcgcgtactgaaaaaaccggcgctacagaatttgccgttgttcaga
gatggcctgatcgaagtgcaggatgaaggtagtcagttgctggcccaaatcgtcggtgcc
aagcgcggcgagatggtggtcgatttttgtgctggtgcaggtggaaaaacgcttgcgctt
ggcgccgcgatgcgcaataccggccgtctctatgcgttcgacatttccgagaagcggttg
gccaaactcaagccacgactggcccgtagcggtttgtccaatgtgcatccagtccagatc
gcgcatgaaaacgatgccaaaatcaagcgacttgctggaaagattgaccgcgtactcgtc
gatgcgccgtgtagcgggctcggtaccctgcgccgcaatccggatgttaagtggcgtcag
acactggtcggcgtagccgagctcaatgtcaagcagacgtcgatcctttccggtgccgct
cgaatggtcaagacgggtgggcgattagtttatgcgacatgcagtttgctcgatgaagaa
aacgaagatatcgtcagcgcattcctggcgacgcacgccgatttcgtgctcgttccgatg
aaggatgtactggccgaacaacgcgtcgacctggagatgcaagactacctcaagctgacg
cccagccagcatcaaactgacggcttctttgctgccgtattcgaacggataaaagtaggc
tga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (15)   
   Pfam (15)   
All databases (16)   

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