KEGG   Anser cygnoides (swan goose): 106049176
Entry
106049176         CDS       T04896                                 
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X3
  KO
K11124  protein SMG6 [EC:3.1.-.-]
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106049176 (SMG6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acyg03019]
    106049176 (SMG6)
   03032 DNA replication proteins [BR:acyg03032]
    106049176 (SMG6)
Messenger RNA biogenesis [BR:acyg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     106049176 (SMG6)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106049176 (SMG6)
DNA replication proteins [BR:acyg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    106049176 (SMG6)
SSDB
Motif
Pfam: EST1_DNA_bind PIN_4 EST1 PIN_9 UPF0561
Other DBs
NCBI-GeneID: 106049176
NCBI-ProteinID: XP_047923962
Position
18:complement(7633784..7742799)
AA seq 1392 aa
MTEVKEPRHRKDNRRPDLEIYKPGLSRLRGKLVSPKHEAAEKERSGAKEGKEESAAGKGP
SAGGAPVAEDFGKGDSHGQNGPLQGNEETEAKGGRQSQESSCKQPAADEWCPKTTRRAKK
PDQQIYQPGKRLHSVAKEPAPRSAAEEVASKMEQLRVEGDKEAEKGSGKDTRKTKPGKED
REGSQAGEGGKTSRGEKGRRAERSDRLRRANDEVMQGKLGSTKRYSRSDKRRSRYRTCST
SSAGSNNSVDGAPLVDGVERRQERARERARARKQLSASSTDSLDEDRIDEAEAYVPSRLA
DKKKRSEQGRASRSESEWSSNGREVKGSFRVTFDSRTMSRDISLADADKKKPPKAFATCN
DSEASEARSQSREPQGRGRGILFLPANTDLSASTAGSPEPGHPGPRLLLAGAGTKSSRSR
GRGGTARRLWDPNNPDQKPALKSQSAQLHFLDTDDEVSPTSWGEARQAQTSYYKFQNSDN
PYYYPRAAAQGPQYPYGGYSLQYPVGPSNGVYPGAYYPGYPGQAGQYVCGPLPPAPLSPE
MEQQMRSMQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRLEMLQLYERCIL
MDIEFSDAQNVDQLLWKNAFYQVIEKFRQLLKDPLGENAQEIRIKLLQLLDEGTLFFDGL
LQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQANDTANY
GKARSWYLKAQQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMS
LFEETKRKAEQMEHKKHQVLELSPSRRGKGKKSTLRQVGDDATRLEIWIHPSHPRSSQGH
ESGRDSEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEEVLREFQVLLQ
HSPPPIGSTRMLQLVAINMFAVYNSQPKECLSEDCRSVIQEQATALGLSMFSLLVRRCTD
LLREWVQVQPQEVEQEDEEDDIKVSALPQDLKELLPSVKVWSDWMLGHPDTWNPPPTSLE
LPKQVSVDVWATLADFCNVLTTVNQSEVPLYKDPDDDLALLSLEEDRLLSGFVPLLVAPQ
EPCYVERTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMG
SQEGKQLEDQKEDDVRIEAFEDDSEAEGSGGELDIKELRAKKQALARKVAEQQRRQDKIQ
AVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLGSLTTLLDCRKFILVVPLIVINELDGLA
KGPEMEHRAAGYARQVQERARKSIEFLEERFESRDNCLRALTSRGNELESISFRSEDTTG
QQGNNDDLILSCCLHYCNDKAKDFMPSNKDDPIRLLREVVLLTDDRNLRVKALTRNVPVR
DIPTFLKWAQEG
NT seq 4179 nt   +upstreamnt  +downstreamnt
atgacggaggtgaaggagccgaggcaccgcaaagacaacaggcgcccggacctggagatt
tacaagcccggcctctcccggctgaggggcaagctcgtgtcgccgaagcacgaggccgcc
gagaaggagaggagcggggccaaggaaggcaaggaggagagcgctgctgggaagggccct
tcggcaggaggggctccagtcgcagaggacttcggcaaaggcgacagccacgggcagaac
ggccctttgcaggggaacgaagagacggaggctaaaggtgggcgtcagagccaggagagc
tcgtgcaaacagcccgctgcggatgagtggtgtcccaagaccacgaggagagccaagaag
ccggaccagcagatctaccagcccgggaagcgcctgcattcggttgccaaagaaccggcc
ccgcgctcagctgccgaggaagtcgcctccaagatggagcagctgagagtcgagggagac
aaagaggctgagaaaggtagcggaaaagacaccaggaaaaccaaaccgggcaaagaggac
agagagggaagccaggccggggaaggagggaaaacctcaaggggagaaaaaggaagacgg
gcggagcgaagcgacaggctgaggagagcaaacgacgaggtgatgcaggggaagctgggc
tccacgaagcgctactcccgctctgacaagcggcgcagccgataccgcacctgcagcacc
agctcagccggcagcaacaacagcgtggacggggccccgctcgtggacggggtggagagg
cggcaggagcgtgccagggaaagggcacgtgccaggaagcagctctctgcgtcctccacg
gactccttggacgaggacagaatcgacgaggcagaagcgtacgtccccagcaggcttgca
gacaagaagaagcgttcagagcagggtcgagcgtctcggagcgagagcgagtggagcagc
aacggccgggaggtgaaggggtccttccgagtcacgtttgacagcaggaccatgagcagg
gatatcagcctggcagacgcggataaaaaaaagcccccgaaggcgtttgccacttgcaat
gactcagaggcttcggaggcgaggagccagagcagagagccccaggggaggggccgcggg
atcctcttcctgcccgccaacacggacctctctgccagcaccgcgggctcccccgaaccc
ggccaccccgggccccggctgctgctcgccggcgccgggaccaaaagctcgcgaagccgg
ggccgaggcggcaccgctcgcaggctgtgggaccccaacaacccggaccaaaaacccgcc
ctgaagagccagagcgctcagctccacttcctagacacggacgacgaagtgagccccacc
tcctggggggaagcccgccaggcccagacgtcctactacaagttccagaactccgacaac
ccctactactacccccgggccgccgcgcaaggcccgcagtatccgtacggcggctactcc
ctgcagtatcccgtgggtccgagcaacggggtgtacccaggagcctactacccggggtac
cccggccaggcggggcagtacgtgtgcggccccctccccccggcccctctgagtcccgag
atggagcagcagatgcggagcatgcagcagcaggagctcagcaagctcctgcgcgaggct
gggaaccaggagcagcagctcagcaatctgctttccagagaccgcatcagcccggagggg
ctggagaagatggcccagctgaggctggagatgctgcagctgtacgagcggtgcatcctg
atggacatcgagttctcggacgcgcagaacgtggaccagctgctgtggaagaacgccttc
taccaggtgatcgagaaattccggcagcttctcaaggaccctctgggggaaaacgcccag
gaaattcggatcaaacttctccagcttctagacgagggcactttgtttttcgacggcttg
ctccagaagctgcaggtgtcgtaccagttcaagctggaggactacatggacgggatggcc
atccgcagtaagcccctgcggaaaatggtgaaatacgcgctgatcagtgctcagaggtgt
atgatttgccaaggggacatctgccgataccgagaacaagcaaacgatacagccaactat
ggaaaggcacgcagctggtacctgaaggctcagcaaatcgctcccaagaacggccgcccg
tacaaccagctggcactcctggccatatacacgaggagaaagctggatgctgtctactat
tacatgcgcagcctggctgccagcaaccccatcctcacagccaaggagagcctcatgagc
ctgttcgaagagacaaaacgcaaggcggagcagatggagcacaagaagcatcaggtgctg
gagctgagccccagccgccgggggaagggcaagaagtccacgttgcgacaagttggggac
gacgccacgcggctggagatctggatccatccctcccacccccgctcctcccagggccac
gagtccggcagggattctgagcaggacaacggtcttgggaacctcagccccagcgacctg
aacaaaaggttcatcctcagttttctccatgcccatgggaagctgtttaccaggattggg
atggagacgttccctgcggtggccgaagaggtcctgagggagttccaggtcctgctgcag
cacagccctcctcccatcggaagcacccgcatgctccagctcgtggcaatcaacatgttt
gcggtgtacaactcccagcccaaagagtgcctctccgaggactgccgctctgtcatccag
gaacaggccacggccctggggctctccatgttctccctcctggtgaggcgctgcaccgac
ctgctgcgggagtgggtgcaagtccagccacaggaggtggagcaggaggatgaggaggat
gacatcaaggtctctgccttgccccaggacctgaaggagctgctccccagcgtgaaggtc
tggtcggactggatgcttggccacccggacacctggaatcctcctcccacctctctggag
ctccccaaacaggtctcagtagatgtgtgggcgacgctggctgacttctgcaacgtactg
accacggtgaatcagtcggaggtgcccctgtacaaggacccagatgacgaccttgccctg
ctcagcctggaagaggatcggctgctctcgggcttcgttcccctgctggtcgccccccag
gagccctgctacgtggagaggacctcggacaaggttattgcagccgactgcaagagggtc
acagttctgaagtatttcctggaagccctttgtggacaagaagagcctttgctggcattc
aagggtggaaaatatgtgtcagtggcacccgtcccagacgccatgggaaaggaaatggga
agccaagagggaaaacaactggaagatcagaaggaagatgatgtgaggattgaggcattt
gaggatgactcagaggctgaaggcagcggaggagagctggacatcaaggagctcagagcc
aagaagcaggcgctggccaggaaagtagctgagcagcagcgtcggcaggacaagattcag
gctgtgctgaaagaccagagtcaaatgaggcagatggagctggagatcagacccgtcttc
ctggtgccggacaccaacggcttcatcgaccacctcggcagcttgacgacgctgctggac
tgcaggaaattcatcctggtggtgcccctgattgtgataaacgagctggatggcctggcc
aagggcccggagatggagcaccgggccgcaggctatgcccgccaagtgcaggagagagcc
aggaagtccatcgagttcctggaggagaggtttgagagccgggacaactgcctgagggct
ctgaccagccggggcaacgagctcgagtccatctccttccgcagcgaggacaccaccggg
cagcaggggaacaacgatgacctgattctgtcctgctgcctccactattgcaacgacaag
gccaaggacttcatgccctctaacaaagacgatcccatccgtttgctccgcgaagtggtt
ctgctgacggacgatcggaacctgcgagtcaaagcgctgacccgcaacgtgccggtgcgg
gacatccccaccttcctcaagtgggcccaggagggctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system