KEGG   Alistipes finegoldii: Alfi_1731
Entry
Alfi_1731         CDS       T02133                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
afd  Alistipes finegoldii
Pathway
afd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:afd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Alfi_1731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afd03021]
    Alfi_1731
   03400 DNA repair and recombination proteins [BR:afd03400]
    Alfi_1731
Enzymes [BR:afd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Alfi_1731
Transcription machinery [BR:afd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Alfi_1731
DNA repair and recombination proteins [BR:afd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Alfi_1731
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 RAD51D_N SAM_EPH DUF4249
Other DBs
NCBI-ProteinID: AFL78062
UniProt: I3YM44
Position
1936476..1937468
AA seq 330 aa
MAILAFQKPEKVIMLESTSSFGKFEFRPLEPGFGMTVGNALRRILLSSLEGYAITTVKVA
GVDHEFAAIPGVMEDMLKIILNLKQVRFIRTVDNQDAEKVSINVAGVTELTAGYISNYLS
FFKVLNPDLVICHLAPGTKMQMTLTIGKGRGYVPAEENTPAECEFGTLPIDSIFTPIKNV
KYSIENYRVEQKTDYEKLNLEITTDGSIHPKEALKEAAKILIQHFMLFSDEKITVNMEDT
NGAEEFDEDVLHMRQLLKTKLSDQDLSVRALNCLKAADVDTVGDLVKLNRNDLLKFRNFG
KKSLTELDELLTSLNLKFGMDVSIYKLDKD
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcaatattagcattccagaaacctgaaaaggttattatgcttgaatccacttcatcg
ttcggaaagttcgagttccggccgctggagcccggattcggtatgactgtcggtaacgct
ttgcgtcgtattctgctctcttcgctggagggttacgcaatcacgactgtcaaggtagcc
ggtgtcgaccacgagtttgccgctatccccggcgtgatggaggatatgttgaaaatcatc
ctcaatctgaagcaggttcgttttatccgcacagtcgataatcaggatgccgagaaggtc
tccattaacgttgcgggtgtgacggagctgactgccggatatatctcgaattacctctcg
ttcttcaaggtgttgaaccccgatctggtgatctgccacctcgcgcccggcacgaagatg
cagatgacgctgaccatcggcaagggccgcggctacgtacccgccgaggagaatactccc
gccgagtgcgagttcggaacgcttccgatcgactcgatcttcaccccgatcaagaacgtg
aagtattccatcgaaaactatcgtgtcgagcagaagaccgactacgagaaattgaatttg
gaaattactaccgacgggtcgattcaccccaaggaggctctgaaagaggccgcgaagatt
ctcatccagcacttcatgctcttctccgacgagaagatcaccgtcaacatggaagacacc
aacggcgccgaagagttcgatgaggacgtactccacatgcgccagctgctgaagaccaag
ctctcggatcaggacctgagcgtccgcgccctgaactgtctgaaagccgccgacgtggac
accgtgggggacctcgtgaagctcaaccgcaacgacctgctgaagttccgcaacttcggc
aagaagtctttgacggagcttgacgagctgctgacctcgctcaaccttaagttcggtatg
gacgtatcaatctacaaacttgacaaagattaa

  All links  
Gene (36)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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