KEGG   Amphiura filiformis: 140153272
Entry
140153272         CDS       T10871                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
afil  Amphiura filiformis
Pathway
afil03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    140153272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afil03400]
    140153272
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     140153272
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH Saf4_Yju2
Other DBs
NCBI-GeneID: 140153272
NCBI-ProteinID: XP_072032076
Position
5:complement(48013235..48037188)
AA seq 660 aa
MDADEAFARQLQQQFEKEERSLQQQEDKDLAMALSMGHAISDSEKEDSDGRESPSMFRSL
TKSKNTNSNASASQDISDSDDTDVEEDAPPKMQKMKSPSKKTPSKKSPSKKQEKDEDMPS
TSKGDTNKRKASSSKDEKPMCQYGSECFRRNKWHLEEFRHPEEDTPVSKKRKIESSKKRT
TEDNARQSTSSSSSSVRSCTDVIQEASPLCFLMTKVSGISSQYNSTKAVHISDILSECMG
ELVESVQFNYMHDISWLVQQYPKKFRSKPLLLVHGEQREGKMRLHEEASAYSHIKLCQAK
LEMMWGTHHSKMMLLLYTNGMRVVIHTANLIHQDWHQKSQGVWISPLFPKLSGSTEGSSI
AGDSPSHFKSDLMEYLAAYKSKSLLDWIAHIKRHDMSNAKVHIIGSVPGRHIGEAKSKWG
HMKMRRILKEHGPVSKDVSNWPVIAQFSSVGSLGPDKSKWLCAEFLQSMTATKGASASFV
RDDNRMLKLIFPSRDNIRTSLEGYPAGGSVPYSIKTAMKQKYFNTFLQQWKARKRGRSRA
SPHIKTYSRLSPDSSSIPWFLVTSSNLSKAAWGALEKNASQLMIRSYEIGVLFLPQHFEP
ESKFFAVGEQTSSSDKQLEFPLPWDVPLVPYTKEDRPWIWDIPYFDKPDSHGNVWAPPPL
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggatgctgatgaagcctttgccagacagttgcagcaacagtttgaaaaagaggaaaga
agcttgcaacaacaagaagacaaggatcttgcaatggcattgtccatgggtcatgccatt
tcagattctgaaaaggaagattctgatggcagggagtcaccgtctatgtttcgttcgttg
acgaaatcaaagaacacaaattctaatgcctcagcatcacaggacatctcagactcagat
gatactgatgtggaagaagatgcaccacctaaaatgcaaaaaatgaagtcaccgtccaag
aaaactccttccaagaagtctccttccaaaaagcaagagaaagatgaggacatgccaagt
acatccaaaggtgacactaacaagaggaaagcatcttcatctaaagatgagaaacctatg
tgtcaatatggatctgagtgtttcaggaggaataaatggcatttagaggaattcagacat
ccagaggaagatacaccagttagcaaaaagaggaaaatagaatcaagcaaaaagaggaca
acagaagacaatgcaagacagtcaacatcatcatcatcatcatctgtaagaagctgtaca
gatgttatccaagaggcatctcctctgtgctttcttatgactaaagtctcagggatttca
tcacagtataacagtaccaaggctgtacatataagtgatatcttgtctgagtgtatgggg
gagctggttgagtcagtgcaattcaattacatgcatgatatatcatggcttgtacagcag
tatccaaaaaagttcaggtctaaacctctgttgttggttcatggtgagcaaagagaagga
aagatgagattacatgaagaagctagtgcctattcacatatcaaactttgccaagccaaa
cttgaaatgatgtggggaacgcatcatagcaaaatgatgctcctgttgtatacaaatggt
atgagggttgttatccacactgcaaatcttattcaccaagattggcaccagaaatcacag
ggtgtatggatcagtcccttattccctaagctgagtggcagcacagaaggcagcagcatt
gctggtgattctcctagccattttaagagtgatttgatggagtatttagcagcctacaaa
tccaagtctcttcttgattggatagctcacattaagaggcatgatatgtcaaatgcaaag
gtacacattataggatctgttccaggaaggcatattggtgaagctaagagtaagtgggga
cacatgaaaatgcgaaggattctgaaggagcatggtcctgtaagcaaagatgtctcaaat
tggccagtaattgcccagttctccagcgtaggttcacttggcccagataagagcaagtgg
ctctgtgcagaattcttacagagtatgacagccaccaagggtgcttccgcaagttttgtt
cgagatgataaccgcatgctgaagttgattttcccgagtcgtgacaacattcgcacaagt
cttgaaggttatccagcagggggttcagtaccatacagtataaagacagccatgaaacaa
aagtacttcaatacattcctacagcaatggaaagcccgcaagagagggcgctctagagct
tctccacatatcaaaacctacagtcgactgtcaccagacagcagcagtatcccatggttt
cttgtaacaagttctaatttgtccaaggcagcctggggagcattagaaaagaatgctagc
cagttgatgatccgctcttatgagattggagtactctttcttccacaacactttgagcct
gaaagcaagtttttcgcagttggagagcagacatcatcatcagacaaacaactagaattt
ccactaccttgggatgtaccattagtgccatataccaaagaggatcgtccatggatttgg
gatataccttactttgacaagcctgattcacatggcaatgtatgggcaccacctcctcta
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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