KEGG   Alnus glutinosa (common alder): 133871182
Entry
133871182         CDS       T10577                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133871182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aglu03019]
    133871182
Enzymes [BR:aglu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     133871182
Messenger RNA biogenesis [BR:aglu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     133871182
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 133871182
NCBI-ProteinID: XP_062164556
Position
6
AA seq 758 aa
MVDSESPNGSSPQTAAKYGITKPISLAGPNEADLQRNMELEKFLIDSGLYESEEEAARRK
EVLGRIDQIVKDWVKQLTRQRGYTDQMVEDANAVIFTFGSYHLGVHGPGVDIDTLCVGPS
YVNRDEDFFIVLHNILADMEEVTELQPVPDAHVPVMKFKFLGISIDLLYASISLLVVPED
LDISHGSVLYDVDEQTVRSLNGCRVADQILKLVPNVEHFRMTLRCLKFWAKTRGVYSNVT
GFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIKENELGFPVWD
PRKNPRDRFHHMPIITPAYPCMNSSYNVSTSTLRVIMEQFHHGHRICQEIELKKAQWSAL
FEPYLFFEAYKNYLQVDIVAADADDLLAWKGWVESRFRQLTLKIERDTNGMLQCHPYPNE
YVDASKPCPHCAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQDINMYMFWKPGMDIFVSH
VRRKQLPAFVFPDGYKRSRLSRHGSQQAEKTCEDDVGCWSGSAERRLKRKNDPETVDVKP
EKPEKRVSISPQPPELVTPESRTSRSGGVSQVSFSEGVRLECLTGHVDSNSEVRSSGGRL
GNEEGIIENHVQMGETVVNDSVNLTEQAFVSSYNLPEVRNEVMVTEAVEKPDMYSQNGDK
VEIAYMESAETGSTCRLLNWTEGAVDADQEVVKPCNQTMGKENAESVLEPSCSTRNLSCE
GDADPHLLLLNECFNVSEVFQNGLSKDLESQILDSSVL
NT seq 2277 nt   +upstreamnt  +downstreamnt
atggtggattctgagagtccaaacggttcttcgccacagacggcggcgaagtacggcatc
acaaagccaatctctcttgccggacccaacgaggccgatcttcagcgcaatatggaattg
gaaaagttcttgattgattcggggctgtatgagagcgaggaagaagctgcgaggagaaaa
gaggtcctaggccgcatcgatcagattgtgaaagactgggtgaagcaattaacccgccag
agaggctacacagatcagatggtggaggatgcaaatgctgtcatttttacttttggctct
tatcatctgggggtacatgggcctggggttgacatagacacattgtgtgttgggccatct
tatgtgaatcgagatgaagatttttttattgttttgcataatattctggcggacatggaa
gaagttaccgagcttcagccagttccagatgctcatgtcccagtaatgaaattcaagttc
ctgggaatatcaatcgatcttctctatgcaagtatatcccttttagttgttccagaagac
ctggacatctcacatgggtctgtgctgtacgatgttgatgagcaaactgttcgaagtctt
aatggctgtagggttgcagatcaaattcttaaacttgttccaaatgttgagcacttccgc
atgacgctcagatgtctgaagttttgggctaaaacaagaggtgtttattcaaatgtgact
ggattccttggtggtgtaaattgggctcttttagtcgctcgggtatgccagctttacccc
aatgcaattcctagtatgctggtttctcggttcttcagagtttatacccagtggcgttgg
ccaaaccctgtgatgttatgttcaatcaaagagaatgaacttgggtttcctgtatgggat
cctcgaaaaaaccctagggaccgatttcatcacatgccaataataactcctgcataccct
tgcatgaattctagctacaatgtctcaacaagtactcttcgtgttataatggagcagttc
caccatggtcacaggatctgtcaggagattgaactgaaaaaagcccagtggagcgctctg
tttgagccatatctattttttgaggcctacaaaaactatttacaggtcgatatagttgca
gctgatgctgatgatttgctagcttggaagggatgggtggagtctcggtttagacaactt
accctgaagatagaaagggacacaaatgggatgctgcagtgccatccttatccaaatgaa
tatgtggatgcctccaagccgtgtccgcattgtgctttcttcatgggcttgcagaggaaa
gagggtgttagaggtcaagaaggccagcaatttgatatacgtggaacagttgatgagttc
aggcaagatatcaatatgtacatgttttggaaaccagggatggatatttttgtttctcac
gttcgtcgaaagcagcttcctgcttttgtttttcctgatggttataaacgttctcgattg
tcaaggcacggaagccagcaggctgaaaaaacttgtgaagatgatgtggggtgttggtct
gggtctgctgaaagacgtctcaagaggaaaaatgatcctgaaacggtggatgttaagccg
gaaaaaccagagaagcgagtctctattagcccacaaccgccagagttggttactccagaa
agtcgtacaagtaggtctggtggagtttctcaggtcagcttcagtgaaggggttagatta
gagtgtttaactgggcatgtagatagcaactctgaggttaggtcatctggtggacggtta
gggaatgaagagggtatcatagaaaatcatgtgcagatgggtgaaactgttgttaatgac
tctgtcaacttgactgagcaagcttttgtaagttcatataatttgccagaagttaggaat
gaggtaatggtaactgaagcagtggagaaacctgacatgtattcccagaatggggacaaa
gttgagatagcttacatggagagtgcggagactggatctacctgcagactgctgaattgg
acggagggtgctgttgatgctgatcaagaagtggtcaaaccatgtaatcagacaatgggt
aaagaaaatgctgaaagtgtattagaaccaagttgcagtactcggaacctcagttgcgag
ggcgatgcagatcctcatttgcttttgctaaatgagtgtttcaatgtgagcgaagtattt
caaaatggcttgtctaaagacttggagagccaaatattggactcgagcgtgttgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system