KEGG   Apium graveolens (celery): 141687169
Entry
141687169         CDS       T11340                                 
Name
(RefSeq) nuclear poly(A) polymerase 1-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141687169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agrv03019]
    141687169
Enzymes [BR:agrv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     141687169
Messenger RNA biogenesis [BR:agrv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     141687169
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 141687169
NCBI-ProteinID: XP_074348457
Position
9
AA seq 727 aa
MGSLGSGNAATGSFGVITGPISTSGPTEFDVVKTAELEKLLADAGLHENREEAIKREEVL
GRLDQIVKIWVKNVFRAKGYNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRYVT
RNDHFFGELHGMLAEIPEIQDLHPVSDAHVPVMKFKYNGISIDLLYANVAMWSIPEDLDV
SQESILQNVDGQTVLSLNGCRVTDQILRLVPNIQNFRMTLRCVRFWAKCRGVYSNVMGFL
GGINWALLVARICQLYPKALPSVLVSRFFRVFKKWHWPYPVMLCPLQESSLGFPIWDPRK
NFKDRQHLMPIITPAYPCMNSSYNVSNSTLRIMVEEFRRGHKICKAMEKDNGSWKILFER
FPFFEAYKHYLQIDISAENDEDSRKWKGWVESRLRLLTLKIERDMAGVLQCHPHPGEFTD
KRRFHFCYFMGLRRNTEADNQEGELFDMRRTVEDFKGAVWKYNYRKPTMLIHVCHAKRKN
LPHFVFPDGVRPPHLVKLSGGSQLPTKRRKNGTSQVNVAASKKMKLDVTGTGISIGESGS
VAMCGDNDEIERNFGTRRNHETGLAGVGLDVKRHTHSHHENEGSVKFCQPSVSECTGSSV
FVDQARDHGQSNEPNSNHQVSSKVLDHLQDNKLMDPVENGVATKGSLVESTTKHEAAEAT
GETTVMGDTPCYKFSVDGGLDELEHSIGVSLGCLAPHSTCSKSLFLWQIFQVLQQRQIIS
LRSHVLG
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgggtagccttggttctggtaatgctgctactggatcgtttggggtgataacgggcccg
atttcaactagtggtcctactgagtttgatgtggtcaagacggccgaattggaaaagctc
cttgcagatgctgggcttcatgaaaaccgggaagaggctattaagagggaggaagtgttg
ggtagactagaccagattgtgaagatatgggtgaaaaatgttttccgtgccaaagggtac
aatgagcagctagtccaagaagcaaatgcaaagattttcacatttggttcttaccgtctt
ggtgtgcatgggcctggtgcagatatagacaccctttgcgtggggcctcgatatgttact
cgaaatgaccatttttttggcgaacttcatggcatgcttgcggagattccggaaatacag
gacttgcaccctgtatctgatgctcatgttcctgtcatgaaattcaagtacaatggcata
tctatagatcttctttatgccaacgttgcaatgtggtctatacctgaagatctagatgta
tcgcaggagtcaatactgcagaatgttgatgggcaaactgttcttagtctgaatggctgc
agagtaactgatcaaattttgcgcttggtcccaaatattcagaatttccgtatgacactc
agatgcgtgagattttgggcaaaatgtcgtggagtatattctaatgttatggggttctta
ggtgggatcaattgggcattgctcgttgctcgcatttgccagctctacccaaaggctctt
ccaagcgtgctggtatctcgattctttcgagtatttaagaagtggcattggccttatcct
gttatgctgtgtccactccaagaatcatctctagggtttcctatttgggatcccaggaaa
aatttcaaagacaggcagcatcttatgccgataataactcctgcatatccctgcatgaac
tctagctacaatgtttcaaacagtacgttgcgcataatggttgaagagtttagaagggga
cataaaatttgcaaggccatggagaaagacaatggtagctggaagatactgtttgagcgc
tttcctttctttgaagcatacaaacattatttgcagatagatatatctgcagaaaatgac
gaggactcgaggaagtggaaaggttgggttgaatctagacttcgtttgcttactttaaag
attgagagagacatggctggtgtacttcagtgccatccacaccctggtgaatttacagac
aagcgacgtttccatttctgctattttatgggtttaaggaggaatacagaagctgataat
caagaaggtgaactgtttgatatgaggagaacagtagaagactttaagggtgctgtgtgg
aagtataattaccggaaacctacaatgctgattcatgtgtgtcatgcaaaaaggaaaaac
cttcctcattttgtctttcctgatggggtcaggcctccccacctcgtaaaactatctggt
ggaagtcagttgcccacaaaacggcggaaaaatggtacttctcaggttaatgttgctgca
tctaagaagatgaaacttgatgtaactggtacaggaatcagcataggtgaatctggttct
gtggccatgtgtggtgacaatgatgaaattgagaggaattttgggacaaggcgaaatcat
gaaactggcttagctggtgttgggttggatgtaaaacgtcatacccacagtcatcacgaa
aatgaaggatctgttaaattttgccaaccttctgtgtcggagtgtactggtagctcagtt
tttgtggaccaagctcgagatcatggacaatccaatgaaccaaattccaaccaccaggtt
tcttcaaaagtgcttgaccatctacaagataataaactgatggatccagttgaaaatggc
gtggctacaaaaggcagtcttgtggagtccacgaccaagcatgaggctgcagaagctaca
ggagaaactacggtcatgggggataccccttgctacaaattttccgtagatggaggcttg
gatgagcttgagcactccattggagtttctcttggatgcttagcaccccattcgacatgc
tctaagagcctatttctttggcaaatattccaagtgttgcagcagagacaaatcatcagc
ctgagaagccacgtattaggttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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