KEGG   Apium graveolens (celery): 141712163
Entry
141712163         CDS       T11340                                 
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141712163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agrv03019]
    141712163
Enzymes [BR:agrv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     141712163
Messenger RNA biogenesis [BR:agrv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     141712163
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 141712163
NCBI-ProteinID: XP_074371089
Position
3
AA seq 735 aa
MAMTGFNNQNHVPHLGITEPISLAGPTEYDVMKTRELEKFLADAGLYESHEESIAREEVL
GRLDQLVKIWVKSISRAKGLNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAE
RDDDFFGELQRMLSEIPEVTELHPIPDAHVPVLGFKFKGVSIDLLYARLSLWVIPDDLDI
SQDSILQNTDDATVRSLNGCRVTDQILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVAGFL
GGINWALLVARICQLYPNALPNMLVARFFRVYTQWRWPNPVMLCANEERSLGLQIWDPRR
NPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGYDICEVMEANRTEWDRLFEP
YPFFESYKNYLQIDICAANEDDLRNWKGWVESRLRQLTLKIERHTFNMLQCHPHPGGFPD
KSRPFHCSYFMGLQRKQGVPANEGEQYDIRLTVDEFKQSVANYTMWKPGMEIRVTHVRRR
NIPSFVFPGGARPRPVRLPGERRRVSSEEQVPGKVCENMVSADVSDGSRKRMLEDGGDGT
DLRSAKSCPKDVSNIDANESGDTWSEISKSSVNEGSERFTNLPTLSSWNGGAVNESVNLV
GLSSAMNGATSSREAEKRETENKIPGLHQPVAELGEIEEGFQYEDQANIVSNTESRGFGQ
SSTENGAGVVTVMTSNGACVNPHFSFNGSLEELEKATDELSVPSSTGMSSMSAVQKKPVI
RLNLTSMAKATGTSN
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggcaatgaccgggtttaacaatcagaatcatgttccacacttgggaatcactgaaccg
atttcgttggctggacccacggaatatgatgtgatgaagacccgtgaacttgaaaagttt
ttagctgatgcgggtttgtatgagagtcatgaggaatcgattgcccgggaggaagtactt
gggaggcttgaccagcttgtcaagatatgggtaaagtctataagtcgcgcaaaggggtta
aatgagcagctggtacatgaagccaatgccaagattttcacttttggttcttatcgtctt
ggggtacatggacctggtgcagatatagatacactttgtgtggggcctagacatgctgaa
cgggatgatgatttcttcggagagctacaaagaatgctttcggagatacctgaagtaaca
gagttacaccccattcctgatgctcatgttccggtgctgggattcaagtttaaaggggtt
tctatagatcttttatatgctagactctctctttgggtcatccctgatgatttggatatt
tcacaagactccatacttcagaacacagatgatgcgacggtccgtagtcttaatggttgt
agagtgacagaccaaatcctgcgactggtgccgaacattcagagctttcgaacaacactt
aggtgtatgagattctgggcaaaacgacgtggtgtttattctaacgttgcaggtttttta
gggggcataaactgggcactgcttgttgctcggatatgtcagctataccctaatgctcta
cccaatatgctagttgctcggttctttagggtatacactcagtggcgttggccaaatcca
gtcatgctctgtgctaatgaagagcgatcacttggcctacaaatttgggatcctagaagg
aatcctaaagacaggtttcacttgatgcctattattaccccagcttatccctgcatgaac
tctagctataacgtgtcatcaagtactttgcggattatgacagaagagtttcaaaggggg
tatgatatatgtgaggttatggaggctaacaggactgaatgggatagactttttgagcca
tatcctttcttcgaatcgtacaagaattatttgcagattgatatatgtgcagcaaatgaa
gatgaccttagaaattggaaaggatgggtcgaatctcgtcttcgccagcttacattaaag
attgagagacacactttcaacatgcttcagtgccatccacacccaggtggattcccagac
aaaagtagaccattccactgttcttacttcatgggcctgcaaaggaaacaaggtgttcca
gctaatgaaggggaacagtatgatatcagactgactgttgatgaatttaagcaatcagtc
gctaattacacaatgtggaaaccaggaatggagatacgtgtaacccatgtaaggcgtaga
aacatacctagttttgtatttcctggtggggcccgtcctcgtccagttagattgcctgga
gagaggaggcgagtttcttctgaagagcaagttcctggcaaggtatgtgaaaatatggtc
tctgctgatgtatctgatggttcaaggaaaagaatgctggaggatggtggtgatgggacg
gacctgagatctgcaaagtcatgtcctaaagatgtcagtaatatagatgcaaatgagtct
ggggatacttggagtgaaattagcaagagtagtgtcaatgaaggatcagagaggtttacg
aatctgcctacattatcttcgtggaatggtggggcagttaatgaatctgtgaatctggtt
ggattgtcatctgcaatgaatggagcaacaagctctagagaggcagagaagcgtgaaacg
gagaataaaattcctggcttgcaccaacctgtagcagaacttggggaaattgaagaaggc
tttcagtatgaagaccaggcgaacatcgttagtaacactgaaagcagaggatttggtcag
tcctcaacagaaaatggagcaggcgtagttactgttatgaccagcaacggtgcttgcgta
aacccccatttttcattcaatggaagcttagaagagctggagaaggctacggatgagctt
tcagtgccgtcttctactggcatgagttccatgtctgcggtacaaaagaagccggtaatc
aggttgaatctgacttccatggccaaggcaaccggcacaagcaattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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