KEGG   Argopecten irradians (bay scallop): 138318570
Entry
138318570         CDS       T10542                                 
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138318570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:airr03019]
    138318570
Enzymes [BR:airr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     138318570
Messenger RNA biogenesis [BR:airr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     138318570
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 138318570
NCBI-ProteinID: XP_069117159
Position
3
AA seq 723 aa
MAEDNTDQKHYPGITSPISLDKPKPLDLKLSAKLEESMRPYGVFESDEQLAHRMDVLHKI
NNIVREWIKEVSRQKSNIPESKIDTFGGKVCTFGSYRLGVHTKGGDIDTLCVAPRHVDRS
DFFSSFYELLKQQDEVKDLRAVEEAYVPVIKMVFDGIELDMLFARLALPQIPEDIDLRDE
ALLKNLSEKCVRSLNGCRVTDEILHLVPNKESFRMTLRAVKLWAKKRGIYSNALGFLGGV
SWAMLVARVCQLYPHAAPATLLHKFFMVFYKWDWPQPILLKPLHTDNRLNFPVWDPRVNP
SDRFHLMPIITPAYPQQNSTFNVSLSTRTIMMEEFKRGLDVVTKIYEVKDDWGKLFEPNN
FFLKYKHYIVLIVSAEEETSYLEWHGYVESKIRLLVGNLERNPFIKIAHVMPASLGPLTE
SEGQYMCKWFIGLTFNEVKNQNIDLTYDIQTFTSTVHRQAVHIKLMKDDMKIEIKHVKRK
QLVQYVPNDLLQRGKSTDVKKKDGRSSIGGSGKPNDLSQGDQSQGLTHSKSDTELLRTDA
ISVDIQDDSSRDSRSGTPIQEGQSPSKDSSCTNGEVEHASQPTDTIMQSPVCVSKKKSSG
QEEDSPVKLSCSEEDSQNVLGSPMHVDSFGQSPSRKREGSPVRPDSPVKRSKSIEESQGN
QNAVESPMDGVKEGEGRDRTIELLSNQHVKRLPSADVPDLMSPQASHTQAVNVARKCIRL
KLK
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcagaagacaacacagaccagaagcactatccggggattacctccccgatcagtttg
gataaacccaagcctctggatttaaagttgtctgcgaaacttgaggagagtatgcgacca
tatggcgtgttcgaaagtgatgaacaactagcacacagaatggatgttttacacaagatc
aataacattgttagagaatggatcaaagaagtgagcagacaaaagagcaacattcctgaa
agcaaaattgacactttcggaggaaaagtttgtacatttggatcatatcgacttggagta
cacactaaaggtggtgatattgatacattatgtgtggcgcccagacatgtggacaggtcc
gacttcttttcctcattctacgagctgctaaagcaacaggatgaagtgaaagatttacgc
gccgtggaggaagcatatgtacctgtgataaagatggtgtttgatggaatcgagcttgat
atgttgtttgcacgcctcgcattgccacagatacctgaagatattgacctgagggatgaa
gcactactcaaaaatttatcagaaaaatgtgttaggagccttaatggttgtcgagtgaca
gacgagatactacatctggtacccaacaaggaaagctttaggatgacactacgagctgtc
aaattatgggcaaaaaagagaggtatctactccaatgcattaggatttcttggtggtgtg
tcatgggccatgttagttgctcgagtctgtcagctttatccacacgctgctccagctaca
cttttacacaagtttttcatggtattctacaaatgggactggccacagcctatcttactg
aaaccactccatactgacaatcgactgaacttccctgtatgggacccaagggtcaacccg
tcagaccgttttcacctgatgcctatcattacacctgcataccctcaacagaattccaca
tttaatgtgtccttaagtactcgaaccatcatgatggaagagttcaaacgaggtctcgac
gttgtcacaaaaatatatgaagtcaaagatgactggggcaaactgtttgaacccaacaac
tttttcctgaaatacaaacactacattgtattgattgtatctgcagaagaggaaacatcc
tacttagaatggcatggatatgtggagtccaagatccgacttttggttggtaacctggaa
cggaatcctttcatcaaaatagcccatgtcatgccagcatcacttggaccactcactgaa
agtgagggacagtacatgtgtaaatggtttattgggctcacatttaacgaggtgaaaaat
caaaacattgatctcacatacgacatacagacatttacatctacagtgcacagacaagca
gtccatatcaagctgatgaaagatgacatgaaaatagaaataaaacatgtcaaacgaaaa
cagcttgtccaatatgtaccaaatgacttgcttcagagagggaaatccacagacgtcaag
aagaaggatggtcggtcgagtatagggggtagtggtaaacccaatgacctgtctcagggt
gatcaatctcagggcctcactcacagtaagtctgacacagagcttctccgcactgatgcc
atctccgtcgacatccaggacgactcgagtcgagattcacggagtggtacacccatacag
gagggtcaaagccctagcaaagacagcagctgtacaaatggggaggtggagcatgcctcc
cagcccacagacactatcatgcagagtccggtctgcgtctctaaaaagaagagcagcggt
caggaagaggacagtccagtcaaactgtcatgttctgaggaagattcacagaatgtgctt
ggatctccgatgcatgttgactcctttggacagagtcctagtaggaaaagagagggatct
cctgtgcgccccgacagtcctgtgaaaaggtccaagtctatagaagagtctcaaggaaat
cagaatgcagtagaaagtcccatggatggagtaaaggaaggagaaggacgagacagaaca
atagaactactcagcaatcagcacgtgaaacgccttcctagtgcagatgtaccggatctc
atgagtccacaggcttcacacacacaagctgtcaatgtcgcacgcaaatgtatccgactc
aagctcaagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system