KEGG T10891: 139964558

Apostichopus japonicus (Japanese sea cucumber): 139964558

Entry

139964558         CDS       T10891

Name

(RefSeq) uncharacterized protein isoform X1

K13100

pre-mRNA-splicing factor CWC22

Organism

ajj Apostichopus japonicus (Japanese sea cucumber)

Brite

KEGG Orthology (KO) [BR:ajj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ajj03041]
    139964558
Spliceosome [BR:ajj03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    139964558
Complex C
   U4/U6.U5 tri-SnRNP related factors
    139964558

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

139964558

NCBI-ProteinID:

XP_071822334

Position

23:complement(2009189..2036228)

AA seq 1602 aa
MSEEKDKSREFSEDELSIGAGDKSDFEEQKASDSDDSTSWKQQRMMSILNKPDAEKEKTD
KQKSDKSDKRKRKEGDGDEDKTSSDEDKTRKSKKRKGEIWKAESEESYRKFEEKYEKKLK
DRQKSDKSSKDKTKEDATPSPSGGDYSKAREKFEKRATKKDGESGDSDKDPEDYEDAQKK
FRERRFQRRDRGRKEDSPDERRDPEDRDRRDRRGNRRDGESGREDRRNKRRDEEKENKAP
DEAEPPPPPRKPKIDDLLTSKTGGAYIPPARLKMMQDQITDKTSVAYQRIAWEALKKSIN
GIVNKANITNMGFIIPEILKLNLVRGRGLLARSVITAQTAAPTFTHVYAGLVAVINTKFP
QNVDLILRRLIVNFKKGFRRNDKTLCASSTRFIAHLVNQQVAHELLALEILTLLLENPTD
DSVEIAVGFMKECGQKLSEVTPRGVHAIFERSRSILHEAAIDKRVQYMVEVMFANRKDGF
KDFPAIADGLELVEESDQYTHMLTLEENYDTEDLLNIFKHDPEYLENEEKYKAIRAEILG
EESSGSDGSGSDDDESGEDSDDDQEEGEVTEKMEIQDETETNLTALRRTVYLTVQSSLDF
EECAHKMMRMEIKPGQETEICLMIIDCCAQLRTYEKFFGLLAQRFCQLKREYAAAYESIF
PEQYSTCHRLDTNKLRNVSKMFAHLFYTDGISWTVLHCIHLNEHETTSSSRIFIKILFQE
LSEYMGLPKLNERLKDVTLQPFFEGLMPRDNPANTRFSINFFTSIGLGGLTEDLRLHLTD
LQKKIMQQHQAVESSSGSSSEEEEEGDSSSSDDSSSSSDGSSASESGNERKAKKRKGKSR
EGADRRKDSTKSRKDGRLEAESHGRKKEDGRKKRKDGKRNERRKSDDDTAERRDGRGHTE
VKERNKGGDRRMNSRRDELMVNGERDDGRRSRDGRRTDRDESKSGRQNDKGNRSVGREGD
ESRGGRRKDEERQQNERRMERDSGEEDKRGRSQRNDRKEDKRKDVERDEDQSYSESEEER
KGKSNRDDSLRFEDKERSGNRSSKRSDKEDRDGQKDKGKQGSRERWENRGGRHDRETGKQ
DIVGREDEQDSREMQDRRQGKRNRNNEDQIVGWSMRQDERGERQMNRPRGERKDGRDLPD
RRQRGDADARENRRGRHSDEEEIDGRKNRRSGAGREEREQIEERSREKDRSEERKRERER
SKEKRRERSEERRKEREMSEERRKERERLEEMRREKEKTEERRRERERSEERRRERERSE
ERRREKKEEERERRSRIEKHRREVERLQRKVEEMTANGRRRSKKVSSSSESESSDDSGLE
ERKSKNLKPQTNRRSKKSSKRESSSDSDDSDSSGSSSSDDGETRQKKEKQKGKSSSESSS
SESSESEDEEEKKDDSRKPERIVRLVEKKEGKRDEIKTTLQRRKEEEDSKRRSRQRKSET
EGSSSSESGSDSSSEEDTKRGKGDHGQRKKKGLQRKGADSSSDEGEEAGGEKVRGKKDSG
GRRKKSEERQRGHSSGSGSGENSSSESSSSSESDGSESESDKGRKQSPQEKKKGNRQDTE
RKSGYDDKRKERKDVDRRTDSRRDRHREIRRRSHSRSPVRRR

NT seq 4809 nt +upstreamnt +downstreamnt
atgagtgaagaaaaggataaaagcagagagttctcagaagatgagctctccattggtgcg
ggtgataagtctgattttgaggaacaaaaagcctctgacagtgatgacagcacatcgtgg
aagcaacagaggatgatgagcatcttaaataaaccagatgcagagaaagagaaaacagac
aaacagaagagtgacaagtccgacaaaagaaagaggaaagaaggtgatggcgatgaggac
aaaacatcttcagatgaagacaaaaccaggaagagcaagaagagaaagggagagatatgg
aaagctgaatctgaagaaagttaccggaagtttgaagaaaaatatgaaaagaagttaaag
gacagacagaagtcagacaaaagcagtaaagataagacaaaggaagatgccacgccgtcg
ccatctggcggagactacagcaaagccagagagaagttcgaaaagagagcgacgaagaaa
gacggggagtccggggactcggacaaggatccggaagattacgaagacgcccagaagaag
tttagagagcggagattccagagaagagacagaggaaggaaggaggattcacctgatgag
agacgagatccagaggacagagatcgccgggacagaagaggaaaccgacgagatggggag
agcgggagagaagaccgtagaaataagaggagagatgaggagaaggaaaacaaagcccca
gatgaggctgaaccaccccctcctcctaggaagcccaagattgacgatctcttgacttcc
aaaacgggcggcgcttacatccctccggccagactcaagatgatgcaagaccagatcaca
gataaaacaagcgtggcttatcagaggatagcctgggaggcactcaagaagagcataaat
ggtatcgtaaacaaagccaacatcaccaacatgggatttatcataccggagatcctaaag
ctcaacttagtcagaggaaggggtcttctggctcggtccgtcatcacagcacagacagcc
gctccaactttcacccacgtctacgctggcctagtcgctgtcatcaacaccaagttccca
cagaacgtcgacctcatcttgcgccgcctcattgtgaatttcaagaagggattccgaagg
aacgataaaacgctctgcgcttcgtctaccaggttcattgcccacctcgtcaatcaacaa
gtggcccatgaattgttagcattggagatacttacccttctgctcgagaacccaactgac
gacagtgttgaaatcgccgtgggattcatgaaggagtgcggccaaaagctatcagaagtg
acccctcggggagttcacgcgatattcgaacgatctcgaagtattctgcacgaggctgcc
atagacaaacgagtccagtacatggtggaggtgatgtttgccaacaggaaggacggtttc
aaggactttccagccatagcagatggtctggaactggtggaggaatcggaccagtacacg
cacatgctcacgctggaggaaaactacgacacagaagacctgctgaatattttcaagcac
gacccagagtatctggaaaatgaagaaaagtacaaagctatccgagctgagattctagga
gaagagagcagcggttccgacggaagcgggtcagacgacgatgagagcggagaggattcc
gacgatgaccaagaggaaggagaagtgacagagaagatggaaatacaggacgaaaccgag
acaaacctaactgctctgaggaggacggtttatctcaccgtgcagtccagtcttgacttt
gaagaatgcgctcataagatgatgaggatggagatcaaaccaggtcaagagactgaaata
tgcctgatgataatcgactgctgcgcacagcttaggacctacgagaaattcttcggcctc
ttggcacagagattttgtcagctgaagcgagaatatgccgccgcttacgagagcatcttt
ccagaacagtactccacttgccatcgactggataccaataagcttaggaacgtctccaaa
atgtttgctcatttattctacacggatggtatatcgtggacggtgttgcactgtatccat
ctgaacgagcatgagaccacttcctccagcagaatcttcatcaagatattatttcaagaa
ctctcggagtacatgggactaccaaaactgaacgagagactcaaggatgtcactctacaa
cccttctttgagggtctcatgccaagagataatcctgccaatactcgtttctccatcaat
ttcttcacgtccatagggcttggaggtcttacggaggatttacgtctacatttaactgac
ctacagaagaagatcatgcagcaacatcaagccgttgaatctagcagtggatcgtcgtca
gaggaggaggaggagggagatagcagtagttcagatgatagttctagctcatcggatggg
agtagcgcatctgagagtggtaatgaaagaaaggcaaagaagagaaaaggaaaatccaga
gagggggcagacagaagaaaagattctacaaagagcagaaaggatggcagacttgaagca
gaatcacatggacgtaagaaggaagatggcaggaaaaagaggaaagatggaaagagaaac
gagagaagaaaatctgatgatgacacggctgagagaagagacggtagaggacatactgag
gtcaaggagagaaacaaaggaggagataggaggatgaacagtaggagggatgagttgatg
gtgaatggagagagggatgatggaaggagaagtagggatggtagacgaacagacagggat
gaatcaaagagcggaagacagaacgacaaagggaatagaagtgttggtcgggaaggagat
gaaagcagaggaggaagaaggaaggatgaggagcgtcagcaaaatgagaggagaatggaa
agggacagtggtgaggaggacaaaaggggacgtagccagagaaacgaccggaaggaagat
aagagaaaagatgtggagagagatgaagatcaaagttatagtgagagtgaagaggagaga
aagggaaagagtaatcgtgatgacagcttacgtttcgaagacaaagagagaagtggaaat
cgatcttctaagagaagcgacaaggaggatagagatgggcagaaggataaagggaagcaa
gggagcagagaaaggtgggaaaatagaggaggaagacatgacagagagacagggaagcaa
gacattgttggcagggaagatgaacaagacagccgtgagatgcaggatcggaggcaagga
aagagaaatagaaacaacgaagaccaaatcgttgggtggagtatgagacaggatgagaga
ggtgaaagacagatgaacagacccagaggagaaagaaaggatggtagagacttacccgat
agaagacaaagaggtgatgcagacgcgagagaaaatagaagaggaagacattccgatgag
gaagaaattgatggtcggaagaatagaaggagtggtgctggcagagaagagagggaacaa
atagaggagagaagcagagagaaagataggtcggaggaaaggaaaagagagagagaaagg
tcaaaggaaaagcggagggaacggtcagaggaaaggagaaaagagagggaaatgtcagag
gaaaggagaaaagagagggaaaggttggaggaaatgagacgagagaaagaaaaaacagag
gaaaggaggagagagagagaaaggtcagaggaaaggaggagagagagagaaaggtcagag
gaaaggagaagagagaaaaaagaagaagaaagagagaggaggtcacgtattgaaaaacat
cgcagagaagtcgagagactgcagagaaaagttgaagagatgaccgcaaacggtcgaaga
cgaagtaagaaggtgtcatcttccagcgaatcagaaagttcagatgacagtggcttggaa
gaaagaaagagtaaaaacttgaaaccacagacaaacagaaggtccaagaaatcttccaaa
agagaaagttcttcagacagtgatgattctgactcgtctggatccagcagtagtgatgat
ggagagacacgccaaaagaaggagaagcagaagggcaagtcctcgtcagagtctagttca
tcagagtcatcagaaagtgaagatgaagaagagaagaaagatgacagtagaaaaccagaa
aggatagtcaggctggttgaaaagaaggaaggcaagagggacgagataaagacaacattg
caaagaagaaaggaggaagaagattcgaagaggcgatcaagacagaggaagtctgagacg
gagggaagcagttcatccgaatcgggaagtgatagctcttcggaagaagacacgaagagg
ggcaaaggagatcatggtcaaaggaagaagaaaggactgcagaggaaaggagctgacagt
tcaagtgacgagggtgaagaggcaggtggtgagaaggtcaggggaaagaaggacagtgga
ggaagaaggaagaaaagtgaagaaagacaaagaggccacagcagtggatctgggtctggg
gagaacagctcctcagagagtagtagcagctcagagtcagacggtagcgaatcagaaagc
gacaaggggcgcaaacagtcaccgcaagagaagaagaaaggaaacagacaggacacggaa
agaaaaagtggttacgacgacaagcggaaagagaggaaggacgtcgatcggagaaccgac
tctcgcagagaccggcacagggaaataagaaggaggtcacactctcgtagtccagtgcga
agaagatga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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