KEGG   Acanthopagrus latus (yellowfin seabream): 119006342
Entry
119006342         CDS       T08233                                 
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145  Phagocytosis
alat04517  IgSF CAM signaling
alat04540  Gap junction
alat04814  Motor proteins
alat05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    119006342 (tubb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    119006342 (tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    119006342 (tubb5)
  09142 Cell motility
   04814 Motor proteins
    119006342 (tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119006342 (tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:alat03036]
    119006342 (tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:alat04812]
    119006342 (tubb5)
   04147 Exosome [BR:alat04147]
    119006342 (tubb5)
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     119006342 (tubb5)
Cytoskeleton proteins [BR:alat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    119006342 (tubb5)
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119006342 (tubb5)
  Exosomal proteins of colorectal cancer cells
   119006342 (tubb5)
  Exosomal proteins of bladder cancer cells
   119006342 (tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 119006342
NCBI-ProteinID: XP_036930883
Position
17:20845424..20850066
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEDEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaagccggccagtgcggtaaccagatcggtgccaagttc
tgggaagtgatcagcgatgagcacggcatcgaccccacggggacttaccacggagacagt
gacctgcagctggacaggatcagtgtctactacaatgaggccacaggaggtaaatatgta
cctcgcgccattctcgtggacttggagccgggaaccatggactccgtgaggtccggaccc
tttgggcagatcttcagacccgacaattttgtgtttggtcagagtggtgctggaaacaac
tgggccaagggtcactacacagagggagctgagttggtggactcagtcctggatgtggtc
cgcaaagagtcagagagctgcgactgcctgcagggcttccagctcacccactcacttggt
gggggaactggctccggtatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gaccgtatcatgaacaccttcagcgtggtgccttcccccaaggtttcagacacagtggtt
gagccttacaacgcaaccctgtcagtccaccagcttgtagagaacacagacgaaacctac
tgcattgacaacgaggccctttatgacatttgcttccgcactctgaaacttaccacaccc
acctacggagaccttaaccacctggtgtccgccaccatgagcggagtcaccacctgcctg
cgcttccccggtcagctcaatgccgatctccgcaaactggcagtcaacatggtgcctttc
ccccgtctgcacttcttcatgcctggcttcgcgcccctgaccagcagaggcagccagcag
taccgtgccctcacagtcccagagctcacccagcaggtgttcgatgccaagaatatgatg
gctgcatgtgacccacgccacggccgctacctgaccgtcgccgctgtgttccgcggccgc
atgtccatgaaggaggtcgacgagcagatgctcaacgtccagaacaaaaacagcagctac
ttcgtcgaatggatccccaacaatgtcaagaccgccgtctgtgacattccaccccgtggc
ctcaagatggccgtcactttcatcggcaacagcacagccatccaggagctgttcaagcgc
atctctgagcagttcacagccatgttccgtcgcaaggccttcttgcattggtacacaggt
gaaggtatggatgagatggagttcaccgaagcagagagcaacatgaatgatctggtgtct
gagtaccagcagtaccaggatgccacagctgaagaggagggtgaatttgaggaggaggct
gaagacgaggcttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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