KEGG T02246: MASE

Alteromonas macleodii ATCC 27126: MASE_19790

Entry

MASE_19790        CDS       T02246

Name

(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

K03495

tRNA uridine 5-carboxymethylaminomethyl modification enzyme

Organism

amac Alteromonas macleodii ATCC 27126

Brite

KEGG Orthology (KO) [BR:amac00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amac03016]
    MASE_19790
   03036 Chromosome and associated proteins [BR:amac03036]
    MASE_19790
Transfer RNA biogenesis [BR:amac03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    MASE_19790
Prokaryotic type
    MASE_19790
Chromosome and associated proteins [BR:amac03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    MASE_19790

SSDB

Motif

Pfam:

GIDA SAM_GIDA_C GIDA_C_1st FAD_oxidored FAD_binding_2 Pyr_redox_2 AlaDh_PNT_C HI0933_like DAO Pyr_redox_3 Pyr_redox Thi4 DUF3670 NAD_binding_9

Other DBs

NCBI-ProteinID:

AFS39440

Position

complement(4644429..4646330)

AA seq 633 aa
MFYAEAFDVIVVGGGHAGTEAALAAARMGANTLLLTHNIETIGQMSCNPAIGGIGKGHLV
KEIDALGGAMALAIDKGGIQFRTLNSSKGPAVRATRAQADRTLYKNAIRDIVENQENLTL
FQQSVDDLIVENDQVCGVVTQMGLKFKAKSVVLTVGTFLGGTIHIGLENYRGGRAGDPPS
IALADRLRALPFRVDRLKTGTPARLDARSLDFSVMQPQPGDNPTPVFSFMGDRTMHPTQI
PCYITHTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKTSHQIFVEPE
GLNSIEVYPNGISTSLPFDVQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLETK
FIRGLFFAGQINGTTGYEEAGAQGLVAGANAALQVQEKDPMILRRDQAYMGVLIDDLATM
GTKEPYRMFTSRAEYRLLLREDNADSRLTAMGREIGLVDDARWAKFNDKMEAVESELQRL
RGQWIHPDHAATPELNTMLKNPVSREHSLEELIRRPEMTYGQLMEIESVGPGLEDPVAAE
QVEIQIKYAGYIARQMDEIAKTQRHENTLLPVDMDFSKISGLSNEVVAKLTEARPETIGK
ASRISGITPAAISLLLVYLKKHGMLRKQEKISA

NT seq 1902 nt +upstreamnt +downstreamnt
atgttttatgctgaagcatttgatgtcatcgttgtaggtggtggacatgcaggtacagaa
gcggcacttgcagctgctcgcatgggtgcaaatacgctgttgctcactcacaatattgag
acgataggccagatgtcgtgtaaccctgcaattggtgggatcggtaaaggtcatcttgta
aaagagatcgatgcgttaggcggtgcaatggcactggctatcgacaaaggcggtattcag
tttagaacattgaattcttctaaaggcccagctgttcgtgcaacgcgtgcgcaagctgac
cgtacgctttacaaaaacgccattcgcgacattgttgaaaatcaagaaaacctaaccctg
ttccaacagagcgttgacgatctgattgttgaaaacgatcaggtatgcggtgttgttacg
caaatgggcttgaagtttaaagccaagtcagtggtactgacagtgggtactttccttggc
ggaaccattcacattggccttgaaaactatcgcggcggtcgtgccggcgatccaccgtct
atcgcacttgcagatagactacgtgcccttccgtttcgtgttgaccgtttaaaaactggg
acaccagcaagacttgatgctcgctcgttagatttttctgtaatgcagcctcaacctggt
gacaatcctacgccggtattttcgttcatgggtgatagaactatgcaccctacacagatc
ccgtgctatatcacccacactaacgaaaaaacccacgatatcattcgcgggggattagat
cgctcacccatgtttacaggggttatcgaaggtatcggaccgcgctattgcccaagtatc
gaagataagatcacccgttttgcagataagacatcgcatcaaatttttgttgagccagaa
ggtttaaacagcattgaagtttatccaaatggtatttcaaccagtttgccatttgacgta
cagatgaaccttgtccgctcgatcaaaggttttgaaaatgcgcacattgttcgtccgggt
tatgcaattgaatacgatttctttgatccacgcgatctgaaacaaacactggaaacgaag
tttattcgaggtttgttctttgctggccaaattaacggtactactggctatgaagaagcg
ggtgcgcaagggttagtagcaggcgcaaacgcagcgctacaagttcaagaaaaagacccg
atgattttacgccgcgaccaagcatacatgggcgtacttatcgacgacttagccaccatg
ggtacgaaagagccgtaccgcatgttcactagccgtgcagaatacagactactgcttcgt
gaagacaatgccgatagccgtttaaccgcgatgggccgagagattggtcttgttgatgat
gcgcgctgggcgaaatttaacgacaagatggaagcggtagaaagtgagctgcagcgtcta
cgcggtcagtggatccaccctgatcacgcggcaacgccggaactcaataccatgctgaaa
aatccggtgagtcgtgaacattctcttgaagaactgatccgtcgacctgaaatgacttac
ggtcagttaatggaaattgaaagtgttggcccaggtcttgaagatccggttgctgcagag
caagtggaaattcaaattaagtacgctggctacattgcccgtcaaatggatgaaatcgcg
aaaacgcagcgacacgaaaacaccctgttgccggttgatatggacttcagcaagatttcc
ggcttgtcgaacgaggttgtagccaagttaaccgaagccagaccggaaacaatcggtaaa
gcatcgcgtatttcgggcattaccccggcggccatctctttactgctggtttaccttaaa
aaacacggcatgttgcgcaagcaagagaaaatcagtgcgtaa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (16)   

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