KEGG   Alligator mississippiensis (American alligator): 102565083
Entry
102565083         CDS       T03087                                 
Symbol
MTO1
Name
(RefSeq) mitochondrial tRNA translation optimization 1
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amj03016]
    102565083 (MTO1)
   03036 Chromosome and associated proteins [BR:amj03036]
    102565083 (MTO1)
Transfer RNA biogenesis [BR:amj03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    102565083 (MTO1)
 Prokaryotic type
    102565083 (MTO1)
Chromosome and associated proteins [BR:amj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    102565083 (MTO1)
SSDB
Motif
Pfam: GIDA SAM_GIDA_C GIDA_C_1st FAD_oxidored Pyr_redox_2 FAD_binding_2 DAO HI0933_like AlaDh_PNT_C Pyr_redox Glyco_trans_4_4 Hexapep_2 Pyr_redox_3 Rtt106_N
Other DBs
NCBI-GeneID: 102565083
NCBI-ProteinID: XP_006275188
Position
Un
AA seq 714 aa
MAASAAVALRRFLPVMPGVAPSMSPPRLLSLRLPPPWSRRAGSDAAARYDVVVIGGGHAG
TEAAAAAARGGARTLLVTHKIDTIGQMSCNPSFGGIGKGHLMREVDALDGLCARLCDRSG
VHYKMLNRRKGPAVWGLRAQVDRKLYKENMQKEILNTPFLTVHEGSVEDLLLKEPESEHP
GKCQVSGVLLGDGSKVHAGSVILTTGTFLRGMVLIGLEKHPAGRLGDQSSTGLAQTLEKL
GFAVGRLKTGTPPRLAKDTIDFSILARQWADSHPVPFSFLSETVWIKPEDQLSCYLTYTN
PKVEKIIHDNLYLNNHVKETTKGPRYCPSLESKVLRFPNRIHQLWLEPEGLDSNIIYPQG
MSMTLPPELQEQVITCIQGLEKAKMVQPGYGVQYDFLDPRQLTASLESRLVQRLFFAGQI
NGTTGYEEAAAQGIIAGINACLRVCGKPPFTISRTEGYIGVLIDDLTTLGTSEPYRMFTS
RVEFRAFLRPDNADSRLTPRGFEETGCVSRQRYERTSQIKAAIEEGVAVLKSLQLPPSKW
SSLIPEIVISSSRSSPVRAFDILQYPEVNMELLARIFPESLGKLAEWRELAERLKIEVVY
KLCTSNQQQEMEEVRRDEALRLPENLDYFTINASLSQEMREKLDSNRPQTIGAVSRIPGI
TPAAILNLLRFVKTNRQRTGGIKVPFRTGRSLPERNTDVLGKSEFQSSNLSRAF
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggcggcctccgcggctgtggctctgcggcgcttcctgccggtgatgccgggtgtcgcc
ccgtccatgtctccgccccggctcctgagcctccgcctcccgccgccctggagccgccgg
gccgggagcgatgccgccgcccgctacgacgtggtggtgatcggcggcggccacgccggg
accgaggcggcggcggcggcggctcgcggcggggcccggacgctgctggtcacgcataag
atcgacacgatcgggcagatgtcctgcaacccctccttcgggggcatcgggaaggggcac
ctcatgagggaagtggacgccctggacgggctgtgtgcccgcctctgcgaccgctcgggt
gtgcactataagatgctgaaccggcgcaagggcccggccgtgtgggggctgcgcgcacag
gtggatcggaagctgtacaaggagaacatgcagaaagaaatccttaataccccattcctg
actgttcatgaggggtctgtggaagatcttctcttgaaggaaccagagtcggaacatcca
gggaaatgccaagtcagtggggtccttcttggtgatggcagcaaagtacatgctggcagt
gtcatactgaccactggcacctttctgcgggggatggtcctcattggattggagaaacat
ccagctgggcgattaggggatcagtcatccactggactggctcagactctggagaaactg
ggatttgctgtagggaggctgaagactggcaccccaccccgacttgccaaagacaccatt
gatttcagcattctggcaaggcagtgggctgacagccatcctgtcccattcagcttcctc
agcgagactgtttggatcaagccagaggatcagctctcatgttacctgacttacactaac
cccaaagtggagaaaattatccatgataatctttacctgaacaaccatgtaaaggagaca
acaaaaggaccccggtactgtccctcacttgaatcgaaagttctgcgctttccaaaccgt
attcatcagctgtggctggagcctgagggtctggattccaatatcatctacccccaagga
atgtcaatgacactgccacctgagctccaggagcaggtgattacatgcatccagggcttg
gagaaagccaagatggtacagccaggctatggagttcagtatgactttctagatcctcgt
cagctcactgcttcccttgagtctcgtctggttcagcggctcttctttgcaggacaaata
aatggcaccacaggctatgaagaagcagcagcccagggaatcattgctggaatcaatgct
tgcctgcgagtctgtggcaaacctcctttcactatcagccgcactgaaggctacattgga
gtcctgattgatgacctcaccacgctgggcaccagtgagccgtaccgcatgttcaccagc
cgagtggagttccgcgcgttcctgagacccgacaatgcagacagcagactcaccccccga
ggctttgaggaaactggctgcgtgtcccggcagcgatatgaacgaacatctcaaataaag
gctgccatagaggagggagttgcagtgctaaagtctcttcaactccctccctccaaatgg
tccagcttgattccagagattgtaatcagcagcagtcgtagctcacctgtcagggccttc
gacatccttcagtatccagaagtcaacatggagttattggcaaggattttcccagaatcc
ctgggaaagcttgctgaatggagagaattggcagaaagacttaaaatagaagttgtttac
aagttgtgtacatccaatcaacagcaggaaatggaggaagtgcgccgagatgaagctctc
cgattgccagagaacctggattacttcaccattaatgcatcactgtcccaggagatgcga
gagaaactggactcaaaccgtccccagacgattggagcagtcagccgcattcctggaatt
acacccgctgccatccttaatctgctgagatttgtgaagactaatcggcaaaggacaggg
ggcataaaggtgccatttaggactggcagatccttaccagagagaaatactgatgtcctt
gggaagagtgaattccagagctcaaatctgagcagggctttctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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