KEGG   Alligator mississippiensis (American alligator): 102576058
Entry
102576058         CDS       T03087                                 
Symbol
CWC22
Name
(RefSeq) CWC22 spliceosome associated protein homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102576058 (CWC22)
Spliceosome [BR:amj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102576058 (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102576058 (CWC22)
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 102576058
NCBI-ProteinID: XP_006263617
Position
Un
AA seq 897 aa
MMKSRVAQMNHGSSYENKESYSSRQRSASPEDRDRSEEDERYSRDRGYSDGKYDKEDAGR
GHDHKTYETRSGEREKHQEKRSDRDSDRRKQRKLSSPDRKSPERSSSQNSFVQNEPPSKK
RKEDLDPILTRTGGAYIPPAKLKMMQEQITDKNSLAYQRMSWEALKKSINGLVNKINVSN
IENIIYELLQENIVRGRGLLARSVLLAQSTSPIFTHVYAALVAIINSKFPNIGELILRRL
ILNFRKGYRRNDKQLCLTASKFVAHLMNQNVAHEVLCLEMLTLLLERPTDDSIEVAIGFL
KESGLKLTEVSPRGINAIFDRLRHILHESKIDIRVQYMIEVMFAVRKDGFKDHPVIPEGL
DLVEEEDQFTHMLPLEDDYNPEDILNVFKMDPDFMENEEKYKTLKKEILDEGDSDSETDQ
DAGSSEADEDEEEEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMD
FPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEAIFKEQYDTIHRLE
TNKLRNVAKMFAHLLYTDSIPWSVLECITLSEETTTSSSRIFVKIFFQELSEYMGLPNLN
ARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIMTQKQD
VESSDTSSSSSESDSFSESDSESISSSTESSSTSDSSSSDSDAAKGKKKMQRKNKERNRV
TRKKQSSKKKQPEKKKERRQQEERNDVERKSERNVDRNLRDPNRRDDVSKYSYRRDDSTD
RSSYQSGKDRGHERSKDLENKHSTSEKKRAERRTSFSDSEKDKAWNKDSDHHSRRKERSK
SRERYQNNSSPKEEQQEDRYRNGGEKRSEKYKRYTDQYRESRKNEDRRRENSPHRRK
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgatgaaaagtagagtggcacaaatgaatcatggctccagttatgaaaacaaagaaagc
tacagctctcgccaaagaagtgcctctccagaagatagggatagatctgaagaggatgag
cggtattccagggacagaggttactctgatggcaagtatgataaagaagatgcaggaaga
ggacatgatcacaaaacttatgaaacaaggagtggggagagagagaagcatcaagagaag
aggtcagacagggattctgatcggaggaaacagcgaaaattatcttcacctgatagaaaa
agtccagaaagatcatcatcccagaactcatttgttcaaaatgaacccccttcaaagaag
aggaaggaagatttggatccaatcctcacccgtacaggtggagcatacattcctccagca
aagctgaagatgatgcaagaacaaattactgataagaacagcttagcatatcaaaggatg
agttgggaagccctgaagaagtcgatcaatggtcttgtcaataagatcaacgtttctaat
atagaaaatattatctatgaacttcttcaagaaaatattgtgagaggaaggggattgctg
gctagatcagtattgcttgcacagagtacctctcctatctttacccatgtttatgctgca
cttgtagcaattatcaattcaaaatttccaaatattggagaactgattctcaggaggctc
attttaaattttcgcaaaggatatcgcagaaatgataagcaactttgtctaacagcctca
aaatttgttgcacacctgatgaatcagaatgtggctcatgaagttttatgtttagaaatg
cttacattgcttcttgaaagacctacagatgacagtattgaagtagcaattggatttctg
aaagagtctgggctcaaattaacagaagtctcccctagaggtattaatgcaatctttgac
cgtcttcgccacattctgcatgaatctaaaattgacatacgtgttcagtacatgatagaa
gttatgtttgctgtacgcaaggatggattcaaagatcatccagtcattcctgaaggacta
gatctagtggaagaggaggatcagtttactcatatgttaccactggaagatgactataac
ccagaggatattctaaatgttttcaagatggatcctgacttcatggaaaatgaagagaaa
tacaaaacccttaagaaagaaattctcgatgaaggtgacagtgactcagaaacagatcaa
gatgctggaagcagtgaggcagatgaagatgaggaagaagaggaagatgaagaaggacaa
aaagtgactatccatgacaaaacagaaattaacttggtctcctttcgtcgtacaatttat
cttgctattcagtcaagtttggactttgaggaatgtgctcacaaattgctgaagatggat
tttcctgagagtcagactaaagaactctgtaatatgatacttgactgctgtgctcagcaa
cgaacatatgagaaattctttggtttactggccgggcgtttctgcttgttaaaaaaagaa
tacatggaatcctttgaagctattttcaaagaacaatatgatacaatccaccgtttagaa
acaaacaaattaagaaatgttgccaagatgtttgctcatctactgtatacagattcgatt
ccttggagtgtccttgaatgtataacattaagtgaagaaactaccacatcctccagcaga
atttttgtcaaaatattcttccaggaacttagtgaatatatgggacttcctaatcttaat
gcaagattaaaagatgaaacactgcagcccttctttgaaggattattgcctcgagataac
ccaagaaacactcgatttgctatcaatttcttcacttctattggtcttggaggactaacg
gatgaattacgagaacatctaaaaaatgcgccaaagataattatgacccagaaacaagat
gttgagtcatcagatacctcctcatcttcctcagagtcagattccttttcagaatcagat
tctgaaagcatcagtagtagtacagagtcatccagtaccagtgactcttctagcagtgat
tcagatgctgctaaaggaaaaaagaagatgcaaaggaaaaataaagaacgtaatagagtt
accaggaaaaagcaaagcagtaaaaaaaaacaacctgaaaagaaaaaggaaagaaggcag
caggaagaaagaaatgatgttgagagaaagtcagaaagaaatgttgacagaaacttgaga
gatccaaataggagagatgatgtttcaaaatattcctatcgcagggatgattccactgac
agaagcagttaccaaagtggaaaggacaggggccacgaaagaagtaaggacttggaaaat
aaacacagtacttcagaaaagaagagagcagagagaagaacttctttttctgatagtgaa
aaggacaaagcgtggaataaagacagtgaccatcacagcaggagaaaagaaaggtccaaa
tctagagaaagataccaaaataattcaagtcccaaagaggaacagcaggaagaccgatat
cgaaatggtggagagaaacgctcagaaaaatacaaacgatatacagatcaatacagagaa
tcaaggaaaaatgaagaccggagaagggagaattctccgcacagacgaaaataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

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