KEGG   Amygdalobacter nucleatus: PYS63_06690
Entry
PYS63_06690       CDS       T09414                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
anq  Amygdalobacter nucleatus
Pathway
anq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:anq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PYS63_06690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anq03021]
    PYS63_06690
   03400 DNA repair and recombination proteins [BR:anq03400]
    PYS63_06690
Enzymes [BR:anq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PYS63_06690
Transcription machinery [BR:anq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PYS63_06690
DNA repair and recombination proteins [BR:anq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PYS63_06690
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DNMT1-RFD HHH_5
Other DBs
NCBI-ProteinID: WEG36814
Position
complement(1480051..1481013)
AA seq 320 aa
MLDNNRPKIETVELSDDKSYGRFVIEPLERGYGQTLGNSLRRVLLSSLPGSAVTSLRVDN
VLHEFSTVKGVVQDMTEIILNVKGIRTRMHVDTPKTIYLARAEGFKGDVYAGDITTDEEV
EIMNPEHLICTMNGSERLFAEFTVANGTGYNTAEQNKWVNQPIGVIAIDSIFTPIKRVKY
AVEDTRVGQVTDFDRLTMEVWTDGTIEADKALAMAASILIEQLSLFKDLTGQAPVAETST
AAPSAEYNQVYDTAIEDLDFSVRTYNCLKRANINTLGDLAVRSEDEMMKVRNLGKKSLEE
VMQKLQDLGFALFKGDSQAE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgttggataataataggcccaagattgaaactgtcgaattgtctgatgacaagtcgtat
ggtcgctttgtaattgaacctttggaacgtggctatggtcaaacattaggcaattcgttg
cgtcgtgttttgttatcttccttaccaggatcagctgttacttctttacgtgtggataat
gtcttacatgaattttcaacggttaaaggcgttgtgcaggacatgacagagattatcttg
aacgttaagggtatccgtacaagaatgcatgtcgatacacctaaaaccatttacttagca
cgtgctgagggctttaagggtgatgtgtatgctggtgatattacaactgatgaagaagtt
gagattatgaatccagaacacttgatttgcacaatgaatggtagcgagagacttttcgct
gaattcacagttgcaaacggtacaggttacaatacagctgaacaaaataaatgggttaat
caacctatcggtgttatcgctatcgactccattttcacacctattaaacgtgtgaagtac
gctgtcgaggatacacgtgtcggccaagttacagattttgatcgcttaacgatggaagtc
tggactgatggcacaattgaagcagataaagctttggctatggcagcctcaatcttgatt
gagcaactcagcttgttcaaagatttgactggtcaagctccagtggctgaaacaagtact
gctgctccaagtgccgaatacaatcaagtatacgatacagctattgaagacttggacttt
agtgtcagaacctataactgtttgaagcgtgctaatatcaacactttgggtgatttggct
gtgcgcagcgaagatgaaatgatgaaggttcgtaatttgggcaagaagtccttggaagag
gttatgcaaaagctgcaagatttaggttttgctctcttcaaaggtgattcacaggctgaa
taa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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