KEGG   Arvicanthis niloticus (African grass rat): 117713624
Entry
117713624         CDS       T08817                                 
Symbol
Ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu00900  Terpenoid backbone biosynthesis
anu01100  Metabolic pathways
Module
anu_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:anu00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    117713624 (Ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:anu01006]
    117713624 (Ggps1)
Enzymes [BR:anu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     117713624 (Ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     117713624 (Ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     117713624 (Ggps1)
Prenyltransferases [BR:anu01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   117713624 (Ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 117713624
NCBI-ProteinID: XP_034365864
Position
8:46999281..47022986
AA seq 300 aa
MEKTKEKTERILLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSKPESTQVQNILRQRTEN
IDIKKYCVQYLEDVGSFEYTRHTLRELEAKAYKQIEACGGNPSLVTLVKHLSKMFAEENE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaaaactaaagagaagactgaaagaattcttctagagccttataggtacttactt
caattaccaggtaaacaggtgagaaccaaactttcacaggcatttaatcactggctgaaa
gttccagaagacaagctacagattatcattgaagtgactgaaatgttgcataatgccagt
ttgctcattgatgatattgaagacaattcaaagctccggcgtggttttccagtggctcac
agcatctatggtatcccatctgtcattaattctgcaaattatgtctactttcttggcctg
gaaaaagtcttaacacttgatcacccagatgcagtaaagctttttacacgccagctttta
gaacttcaccagggacaaggcctagatatttactggagggacacctacacttgtccaact
gaagaagaatataaagccatggtgctgcagaagacaggtggtttgtttggattagcagta
ggtctcatgcagctgttctctgattacaaagaagacctaaagccactgctcgacacactc
gggctctttttccagattagagatgattacgccaatctacactccaaagaatacagtgaa
aacaaaagtttctgtgaagacttgacagaaggaaagttctcattccccactattcatgcc
atttggtcaaagccagaaagcacgcaggtacaaaacatcctgcgccagagaacagaaaat
atagatattaaaaagtactgtgtgcagtacctggaggatgtaggttcttttgaatatact
cgacacactcttagagagcttgaagctaaagcctacaaacaaattgaggcctgtggtggg
aacccttcactagtgactttagtcaagcatttaagtaagatgttcgcagaagaaaatgaa
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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