KEGG   Anaerococcus obesiensis: I6H46_07015
Entry
I6H46_07015       CDS       T07194                                 
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
aob  Anaerococcus obesiensis
Brite
KEGG Orthology (KO) [BR:aob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aob03009]
    I6H46_07015 (rlmD)
Enzymes [BR:aob01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     I6H46_07015 (rlmD)
Ribosome biogenesis [BR:aob03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    I6H46_07015 (rlmD)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Cons_hypoth95 MTS PrmA Methyltransf_25 Methyltransf_15 TRM5-TYW2_MTfase Methyltrans_SAM Ubie_methyltran Methyltransf_12 Methyltransf_4 Methyltransf_11 UPF0020 TPMT Methyltransf_32
Other DBs
NCBI-ProteinID: QQN55634
UniProt: A0A7T7UT44
Position
1391840..1393087
AA seq 415 aa
MEIKNIKIIDILQDGRAVAKTQSKTAFIEGAIYGEICNIKVNNEKKNFFEAEKTKTLEKS
PYLRKPPCPYYYECGGCSIMDINYKTQIKLKKNLIKNALLKSAKIKIDDIEILEGEEFGY
RNKIRLQINKNGKLAYNKKYSNDLVEIKDCLLAKDLIRENLEKIEKITKDITKKYPNSLE
EITIRANEKEILLNIKIKDEKIIPYIKNQYKDSTYNINLINKKEKINISGKDYLIYNLLG
KKFKISMNDFYQVNDYMTEKLYKTAKDFLGENQKVLDLFCGSATSSIAINDDHVVGIEIN
KNAIKDAKENAKENDLKDYKFIAKNANYIDDKFIKKEKIDAIVLDPPRAGLDKEIIKTIA
KTKIKKIVYISCNPQTLARDIKRFQENGYNLEKIKGCDMFSETMHVEMVALIARD
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaaataaaaaatatcaaaataattgatattctacaagacggtagggcagttgcaaaa
acacaaagcaaaactgccttcatagaaggcgcaatttacggagaaatttgcaatataaaa
gtaaataatgaaaaaaagaatttctttgaagcagaaaaaacaaaaactttagagaaatcc
ccctaccttagaaaaccaccatgtccatattattatgaatgtggtggttgttctattatg
gatataaattataaaactcaaataaaattaaagaaaaatttaataaaaaatgccctatta
aaatcagcaaaaataaaaatagacgatatagaaatactagaaggagaagaatttggatat
agaaataaaattaggttacaaataaataagaatggaaaacttgcctataacaaaaaatat
tccaatgaccttgtagaaataaaagattgccttttagcaaaagatttaataagagaaaat
ctagaaaaaatagaaaaaatcacaaaagatattacaaaaaaatatccaaatagcctagaa
gaaatcacaataagagcaaacgaaaaagaaatacttttaaatataaaaataaaagacgaa
aaaattatcccatatataaaaaatcaatacaaagattcaacttacaacattaacctaata
aataaaaaagaaaaaataaatatttcaggcaaagattatctcatatataatctattagga
aaaaaattcaaaatatctatgaacgatttttaccaagtaaatgattatatgacagaaaaa
ttatacaaaacggccaaagatttcttgggagaaaatcaaaaagtcctagacttattttgt
ggctcagcaacaagctcaatcgccataaacgatgatcatgttgtaggaatagaaataaac
aaaaacgccataaaagatgcaaaagaaaatgcaaaagaaaatgatctaaaagattataaa
ttcatagcaaaaaacgcaaactatatagacgataaatttataaaaaaagaaaaaatagac
gccatagttctagacccaccaagagcaggattagataaagaaataataaaaaccatagca
aaaacaaaaataaaaaaaatagtctacatctcctgtaacccccaaacactagcaagggat
ataaaaagattccaagaaaatggatataacttagaaaaaatcaaggggtgtgatatgttt
tcagagactatgcacgttgagatggttgcattgattgcaagggactag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (18)   

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