KEGG   Amphiprion ocellaris (clown anemonefish): 111583920
Entry
111583920         CDS       T06018                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aoce03041]
    111583920 (cwc22)
Spliceosome [BR:aoce03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    111583920 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    111583920 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G New_glue Cnd1
Other DBs
NCBI-GeneID: 111583920
NCBI-ProteinID: XP_023148952
Ensembl: ENSAOCG00000023641
UniProt: A0A3Q1CUT0
Position
11:4285236..4309096
AA seq 973 aa
MDSPDRSRSPSPAQKEHSGPSEDESSPAAGGPQQASPVERSPKERPSPQASPSGSGSAAS
SSSDSSSSSDDEDEHQGALRKIRSSVAQIKRSRSKEQDRSRSREQDRSRSREQDRSRSRE
QDRSRSKGRDRSRSREQDKSRSRSKERDRSRGRNRSRSGSRERARSRSRGRDRSRSRERF
HDRRRYARDRYDDRRDDRDGRFDRRAYRDGESDHRRRGRSASPPADREPVVAEEPPVKKK
KEELDPILTRTGGAYIPPAKLRMMQQQITDKSSLAYQRMSWEALKKSINGLINKVNVSNI
VNIIQELLQENIVRGRGLLARSVLQAQAASPIFTHVYAAVVAIINSKFPQIGELILKRLI
LAFRRSYRRNLKQQCLTASKFVGHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIAFLK
ECGLKLTEVSPRGINAIFERLRNVLHESSIDKRVQYMIEVMFAIRKDGFKDHPVIPEGLD
LVDEDDQFTHMLPLDDEYNTEDILNVFKMDPDFLENEEKYKTIKRDILDEGSSDSGEEGD
GSDEDEDDEEENEEEGEDEKVTIFDKTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDF
PDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEGIFSEQYDTIHRLET
NKLRNVARLFAHLLYTDSVPWSVLECIRMSEETTTSSSRIFVKILFQELCAYMGLPKLNQ
RLKDQTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEV
ESSDSSSSSSSSSSSSDSSSSDSSSESDSSDSDSSSSSSSSSDSDNKHRKKKKRKEQSEE
KKKKKEKEKKKEKPDKKRHGRRNGDDGDDGKQARKDQRGRARDLEERAREGARRSRRDER
SDEDERREDEERRRKMDRQRDDKRERERERARERENEEKRERERERDKQRERDRDRERNK
ENRDRNREERRRR
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggactctccagacagaagtcgaagtcccagtcctgcacagaaagaacacagtggacct
tcagaggacgaatccagtccagcagcaggggggcctcagcaggccagtccagttgagaga
agccccaaagagcgtccgtcccctcaggccagtccttctgggtctggaagtgctgcttcc
agcagctcagacagcagcagcagcagtgatgatgaggatgaacatcaaggtgctctgagg
aagatcagaagcagcgtggctcagatcaaaagatccagatccaaagagcaagacagatcc
agatccagagagcaagacagatccagatccagagagcaagacagatccagatccagggaa
caagacagatccagatccaaaggacgagacagatccagatccagggaacaagataaatca
agatccagatccaaagaaagagacagatccaggggacgaaacagatccagatccggatcc
agagagagagccagatccagatcaagaggacgggaccgatcgagatcgagggagagattc
catgacagaagacgctatgctcgggatcgctatgatgatcgccgtgatgacagggacggc
cgttttgaccgacgggcctaccgggacggcgagtcggatcacaggaggcggggccgctcc
gcctcccctccggctgacagggagccggtcgtggccgaggagccgccggtcaagaagaaa
aaagaggagctggatccgatcctgacgaggaccggtggagcttacatcccccctgctaag
ctacgcatgatgcagcagcaaatcaccgacaagagcagcctggcgtatcagaggatgagc
tgggaggctctgaagaagtccatcaacggtctgatcaacaaagtcaacgtgtccaacatc
gtcaacatcatccaggagctgctgcaggagaacatagtcagggggaggggtcttctggct
cgctctgtgctccaggctcaggcagcttctcccattttcactcacgtctacgctgctgtt
gttgccatcatcaactcaaagttccctcagattggagagctgatcctcaaacgcctcatc
ctggccttcaggagaagctaccgccgcaacctcaagcaacagtgcctgacagcctccaag
tttgtgggtcatctcatcaaccagaacgtggcccatgaggttctgtgtctggagatgctc
actctgctcctggagcgtccgaccgacgacagcgtggaggtcgccatcgccttcctgaag
gagtgtggactcaaactgactgaagtgtctccccgaggaatcaacgccatatttgagcgt
ctcaggaacgtcctccacgagtcgtccatcgataagagggtccagtacatgatcgaggtg
atgtttgccatcaggaaggacggcttcaaagatcatccggtgatcccggagggcctggac
ctggtggacgaggacgaccagttcacacacatgctgccgctggacgacgagtacaacacc
gaggacatcctgaatgtttttaagatggacccggacttcctggagaatgaggagaaatac
aaaaccatcaaacgagatattctggacgaaggcagcagcgattcaggggaggagggagac
ggcagcgacgaggatgaagatgatgaagaggagaacgaggaggagggagaagatgagaag
gtcaccatcttcgataagacagaagtcaacctggttgctttcagaagaaccatctacctc
gctattcaatccagcttggactttgaagagtgtgcccacaaactgatcaagatggacttt
ccggacagccagacgaaggagctgtgcaacatgatcctggactgctgcgctcaacagagg
acctacgagaagttctttggtctgctggccgggaggttctgtctcctgaagaaggagtac
atggagagttttgaggggatattttcagagcagtacgacacgattcaccggctggagacc
aacaaactgaggaacgtggcccgactgttcgctcacctgctctacacagattctgtgccc
tggagtgtgttggagtgcatcaggatgagtgaggagaccacgacgtcgtccagcagaatc
tttgtaaagatccttttccaggagctctgtgcctacatgggtctcccgaaactcaaccag
aggctgaaagaccaaactctgcagccattctttgaaggtctttttcctcgtgataatcca
agaaacactcgcttcgccatcaacttcttcacctccatcggactgggaggactgacggac
gagttgagggaacatttgaagaacgcaccaaagatgatcatgactcagaaccaggaagtt
gaatcctccgactcctcctcgtcttcgtcctcctcttcctcctcatctgactcctcttct
tcagactcctccagcgagtcggactcctcggactctgattcgtcatccagcagcagcagc
agctcagactccgacaacaaacacaggaagaagaagaagaggaaagaacaaagtgaggag
aagaagaagaagaaagagaaggaaaagaagaaggagaaacccgacaagaagcgacacgga
cgcaggaacggcgacgacggcgacgacgggaagcaggcgaggaaggaccagaggggccgt
gcacgtgatctggaggagcgtgcacgtgagggcgcccgtcggagcagacgagacgagaga
tcggacgaagacgagcggcgggaggacgaggagaggaggcgaaagatggacagacagaga
gacgacaagagggagagagagagggagcgagcgagggagagggagaatgaggagaagaga
gagagggagagagagagagacaaacagagagagagagacagagacagggagaggaataaa
gagaacagagacaggaacagagaggagaggaggaggagataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system