KEGG   Anas platyrhynchos (mallard): 101799587
Entry
101799587         CDS       T02816                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla04010  MAPK signaling pathway
apla04020  Calcium signaling pathway
apla04510  Focal adhesion
apla04518  Integrin signaling
apla04519  Cadherin signaling
apla04540  Gap junction
apla04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:apla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101799587 (PDGFRB)
   04020 Calcium signaling pathway
    101799587 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    101799587 (PDGFRB)
   04519 Cadherin signaling
    101799587 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101799587 (PDGFRB)
   04540 Gap junction
    101799587 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101799587 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:apla01001]
    101799587 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:apla04090]
    101799587 (PDGFRB)
Enzymes [BR:apla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     101799587 (PDGFRB)
Protein kinases [BR:apla01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   101799587 (PDGFRB)
CD molecules [BR:apla04090]
 Proteins
  101799587 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set VEGFR1-3_N_Ig-like ig Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 BACON_2
Other DBs
NCBI-GeneID: 101799587
NCBI-ProteinID: XP_038042251
Ensembl: ENSAPLG00000013101
Position
14:complement(5750759..5778202)
AA seq 1093 aa
MLCPSLKALLRLLILTGLLEVTTGGSGLRIEPEKAEHVLSLHSTFSLVCYGDGALVWEWD
GQPLTASLEHRDGVFVSNLTLRNVTGRHTGEYACTYSPDQAPEQAERKAIYIYVPDPSLA
FLPTTTSEELFIFITGYKEAVIPCRVTDPHLQVTLFEKKVENPIPAAYDPQQGFKGFFED
KTYYCQTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSSHDIRSILIIQDAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIERGFVKFHTQLASTVYAEVHKSHTIQVDLEAYPQPSIVWLKNNKALTMESSSEF
TITNRNLSETRYQTSLVLVRVKQEEGGFYTIRAANEDDVQELSFYLQINVPAKVVDLKEN
SSATSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNDSAEISLQTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQAYGDKARREAEAYGNTAKDDHV
HSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLSNTRLTPSSPTSSILYTAVHQNGGENDYI
IPLPDPKPEAVCDLPQEVSISRASSMLNEANTSSTISCDSPLGTQQDEEQGSDPQLGCQE
PTTGHHEVEESFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgctgtgcccctctctgaaggctttgctgcggctcctcatcctcaccggtctgctggag
gtgacgacgggaggcagcgggctgcgcatcgaacccgaaaaagccgagcacgtcctcagc
ctccacagcaccttctccctcgtgtgctacggggacggcgcgctggtctgggagtgggat
ggccagcctctcaccgcctcgctggagcacagggacggggtttttgtcagcaacctcacc
ctcaggaacgtgacgggccgtcacaccggggagtacgcctgcacctacagccccgaccag
gctccagagcaagcggagaggaaagccatctacatctacgtgccggatccctccctagcc
tttctccccacaaccacctctgaagagctcttcatcttcatcacgggctacaaagaggcc
gtcatcccttgccgtgtgaccgacccgcacctgcaggtcaccctctttgagaagaaagtg
gagaaccccattccagctgcttatgacccgcagcagggcttcaaaggcttctttgaggac
aagacctactactgccagacaatcgtggatgaccaggaggtggattcagacaccttctat
gtctacaggatccaggtctcgtctgtgaacgtctccatcagcgcggtgcagaccgtggtg
cgtcagggggaaaacgtcaccctgatgtgcaccgtgagcggcaacgagctggtcaacttc
aactgggattacccccgcaagcaggcagggaaggctgtggagccagtgaccgacttcctg
ccggggtcctcccacgatatccgctccatcctcatcatccaggacgcggagctggaggac
agcggcacctacgtctgcaacgtctctgagggctaccacgagaaaacagatcggaaagac
atcacggtccaagtcatcgagcgtggctttgtgaagttccacacccagctggccagcaca
gtgtacgctgaggtccacaagagccacaccatccaggtggacctggaggcctacccacag
ccgagcatcgtgtggctgaagaacaacaaggcgctgaccatggagagcagcagcgagttc
accatcaccaacaggaacctgtccgaaaccaggtaccagacgtccctggtcctggtgcgg
gtgaagcaggaagaaggaggattttacaccatccgggctgccaatgaggacgatgtacag
gagctgtccttctacctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccaccagtggggagcagaccgtaacgtgctctgctgaagggatgccccagcca
gagatcagctggtccacctgcagtgacatcaaatggtgcagcaccaaggggcagcccacc
cggctgctggggaacgactcggcagagatcagcctgcagaccaacgccacgtaccacgcg
gagctgcaggtgtaccgcgtgaacagcaccctgcagctgcaccgcgtggacgagcccctg
ctcctgaggtgcaccgtgcaaaacttcctgggcaccaactcccaggacatcaccctggtc
ccgcacgccttgccgttcaaagtggtcatcatctccgtcatcctggccttgctggtcctc
accgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgttacgaaatc
cgctggaaggtgatcgagtcggtcagctccgatgggcacgagtacatctacgtggatccc
atgcagctcccctatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
accctcggctccggcgcttttggccgcgtggtggaggcgacagcccacggcctgagccac
tcgcagtccaccatgaaggtggcggtgaaaatgctcaagtccacagcccgcagcagtgag
aagcaggccctcatgtccgagctgaagatcatgagccacctggggccccacctcaacatc
gtcaacctgctgggggcctgcaccaaaggggggcccatctacatcatcacggagtactgc
cgctacggggacctggtggactacctgcaccgcaacaagcacaccttcctgcaggcctac
ggcgacaaggcgcgccgggaggccgaggcgtacgggaacacggccaaggacgaccacgtg
cacagtcacctctccttgtctgtcgagagcgatgggggctacatggacatgagcaaggat
gactccctggattacgtgcccatgtccgacatgaagggcgaagtcaagtatgctgacatc
gagtcctctaactacggcaccccgtacgagctggacagttattccccttcagcccccgaa
agaacagaccgggtgactctgataaacgagtctccgctcctcagctacatggacttggtg
ggcttcagcttccaggtggccaacgggatggagttcctggcttccaaaaactgtgtgcat
cgcgacctggctgccaggaacgtcctcatctgcgaggggaagctggtgaagatctgcgac
tttggcctggcgagggacatcatgagggattccaactacatctccaaaggcagtaccttc
ttgccccttaagtggatggccccggagagcatcttcaacaacctctacaccaccctgagt
gatgtgtggtcctttgggattctcctctgggagatattcactctaggagggactccatac
cccgaactgcccatgaacgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aagcccacccatgcctccgatgaaatctacgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccgtccttctcacagcttgtggtgctcatggggaacctcttggtggat
tgctacaggaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgct
gttgtccgcacgagacccacgatccctgggctgagcaacaccaggctcactcccagctcc
cccaccagcagcatcctctacacggccgtgcaccagaacgggggcgagaacgactacatc
atccctctccccgaccccaagcccgaggcggtctgtgacctccctcaggaggtctccatc
agccgtgccagctcaatgctgaatgaagccaacacatcgtctacgatatcctgtgacagc
cccctgggcacccagcaggacgaggagcagggatccgacccacagctgggctgccaggag
ccgaccacggggcaccacgaggtggaggagagcttcctctag

  All links  
Gene (6)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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