KEGG   Aeromonas rivuli: KYK33_16700
Entry
KYK33_16700       CDS       T07884                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ariv  Aeromonas rivuli
Pathway
ariv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ariv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KYK33_16700 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ariv03019]
    KYK33_16700 (rnc)
   03009 Ribosome biogenesis [BR:ariv03009]
    KYK33_16700 (rnc)
   03036 Chromosome and associated proteins [BR:ariv03036]
    KYK33_16700 (rnc)
Enzymes [BR:ariv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     KYK33_16700 (rnc)
Messenger RNA biogenesis [BR:ariv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KYK33_16700 (rnc)
Ribosome biogenesis [BR:ariv03009]
 Eukaryotic type
  90S particles
   RNase
    KYK33_16700 (rnc)
 Prokaryotic type
  rRNA processing factors
   KYK33_16700 (rnc)
Chromosome and associated proteins [BR:ariv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     KYK33_16700 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: UBO76083
Position
complement(3630807..3631478)
AA seq 223 aa
MNIKMNRLQSRLGHVFSDKDMLTRALTHRSAGSRHNERLEFLGDSILSLVIADALFHRFP
QAAEGDLSRMRATLVREKTLAELGREFELGDHLILGPGELKSGGYRRESILADTVEAMIG
AVYLDTDLEAVRTLLLSWYASRLDEIKPGIEQKDPKTRLQEILQGSRKSLPTYTVTKVKG
EAHNQEFTVHCEVDGLDEPLIGVGTSRRKAEQAAAQQALERLS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgaatatcaagatgaacagactgcagtcccgtctcgggcatgtcttttcggacaaggat
atgttgacccgcgccctgacccacagaagcgcaggatcccgccacaacgagcgtctggag
ttcctcggggactccatcctcagcctggtgattgctgatgcgctcttccaccgcttcccg
caagcagcggaaggggatctcagccggatgcgtgccaccctggtgcgcgagaagaccctg
gccgaactcggccgcgagttcgagcttggggatcacctgatcctggggccgggcgagctc
aagagcggcggttatcgtcgtgaatccatcttggccgatacggtcgaggcgatgataggc
gccgtctatctggataccgatctcgaggcggtgcggaccctgttgctgagctggtatgcc
agccgcctggatgagataaagccgggcatagagcagaaggatcccaagacccgcctgcaa
gagatactgcagggaagccgcaaatccctgccgacctacactgtgaccaaggtcaagggt
gaggcgcacaatcaggagttcaccgtgcactgtgaggtggatggcctggatgagccactt
attggggtcggcaccagccgccgcaaggccgagcaggccgcggcgcagcaagcactggaa
agactgtcatga

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