KEGG T10705: 135240396

Anguilla rostrata (American eel): 135240396

Entry

135240396         CDS       T10705

Symbol

cwc22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

arot Anguilla rostrata (American eel)

Brite

KEGG Orthology (KO) [BR:arot00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arot03041]
    135240396 (cwc22)
Spliceosome [BR:arot03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    135240396 (cwc22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    135240396 (cwc22)

SSDB

Motif

Pfam:

MA3 MIF4G Cnd1 DUF7026

Other DBs

NCBI-GeneID:

135240396

NCBI-ProteinID:

XP_064165881

Position

15:complement(587905..622417)

AA seq 1232 aa
MSFTENSNPWSPGLGHSDRHGIRRATGKMAAQSNDAEVENLINSASKEEPPASVAMEQLQ
RSRSRSRDGSRSQSRDHSRSQSLDRSRSRSRSRGRSRSPSAQGDGDRMSCSKIVAESGVG
GQASPADVGRSGSSRGGSGPSDSDSDTSGDTDSEEGEGRRMKSSVAQIRRGSDDGSRNRR
RSSSAEYRHRERGRSRSRSRSRSRSRSPHSQDRERSEERGRRHGRGYYGAGRNRDRSRGR
YSSRERYRERRSSWDREAEPRRRGRSASPAQRDDPPVEEPPVKKKKEELDPILTRTGGAY
IPPARLRMMQAQITDKSSLAFQRMSWEALKKSINGLINKVNVSNIANIIHELLQENIVRG
RGLLSRSVLQAQSASPIFTHVYAAVVSIINSKFPQIGELILRRLILNFRKGYRRNDKQQC
LTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGIN
AIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHLLPLE
DDYNQEDVLNVFKMDPDFLENEEKYKAIRKEILDEGSSDSGSGDEADGSDEEEGDEEEEA
GEDDQEKITIFDKTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPTTASKELCNMIL
DCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARMFAHL
LYTDSVPWSVMECIKVSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDVTLQCFFEG
LFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVSSDSDSSSSSSDS
SSSSSDSESSSDSESSSDSSSQSDSSSSSSDSDSRQKRKEQSSGRKDKRPGRMARTEERH
AVRQEEPHGPLDRRREPRPSDHDRSSQDRDHNPKDRDRSPKGRDRNRDRNPKDRDRNPKD
RDRDRDFSPKGRDRSPKGRDRSPKDRDRNPKGRDRDRDFSPKGRDRSPKGRDRSPKDRDR
SPKGRDRSPKGRDRSPKGRDRSPKGRDRSPKGRDRSPKDKDRNPKDRDRSPKDRDRDRDF
GPKDQDRNPKGRNRDRSPKDRDRDFSPKDRDRNPKGRDRDRSPKDRDQNRSPIDWDRRPN
REQSDRQSDPAKRQDRAKNGSHPEPERERRQSPEDRRTDRSPSGDRRRKETDPREGHRNG
LERRAERADKENRHRDSRKAERNSDTSPRRRR

NT seq 3699 nt +upstreamnt +downstreamnt
atgagcttcacggagaatagcaatccctggtccccaggtctggggcactccgaccgtcac
ggcatccgtagagcaacaggaaaaatggcggcgcaatccaacgatgctgaagttgaaaat
ctgattaactctgcttcaaaagaggagcctcctgcttctgtggccatggagcagctccag
aggagccggagccggagtcgcgatgggagtcggagtcagagccgggatcatagccggagt
cagagtctggatcggagcaggagccggagccgaagcagaggccggagccggagtccctcg
gcacaaggagacggtgacagaatgagctgcagtaagattgttgcagaaagcggggtgggc
ggccaggctagcccggcagacgtggggaggagtgggagctccagaggggggtccgggccc
agcgactcggacagcgataccagcggagataccgacagcgaggagggcgagggccgcagg
atgaagagcagcgtggcccagatcaggcgtgggtctgatgacggcagcaggaaccgacgt
aggagctcctctgcagagtatagacacagagagcgggggcggtccaggtccaggtccagg
tccaggtcccggtcccggtcccctcacagtcaggacagggagcggtctgaggagcggggg
cgtcgtcacggcagaggttactatggcgccgggagaaaccgtgacaggtcgagggggcgg
tactccagcagagagcggtatcgggagcgccgctccagctgggacagggaggcagagcct
cggcggcggggccgctcggcctcccccgcgcagagggacgacccccccgtggaagagccc
cccgtcaagaagaagaaggaggagctggaccccatcctgacccgcacgggtggggcctac
atcccccccgccagactgcgcatgatgcaggcacaaatcaccgacaagagcagtctggct
ttccaaagaatgagctgggaggcactgaagaagtccatcaatggtctcattaataaagtc
aacgtgtccaacattgccaacatcatccacgagcttctgcaagagaacatcgtgaggggc
agggggctcctctctcggtcggttctccaagctcagagtgcatcccccattttcactcac
gtctatgctgctgtggtgtccatcatcaactccaagttcccccagatcggagagctcatt
ctgaggagactcatcctgaacttccgcaagggctacaggaggaacgacaagcaacaatgt
ctgacagcatccaagtttgtggctcacctcattaatcagaatgtggcccacgaggtgctc
tgtctggagatgctgaccctgctgctggagcggcccacggatgacagcgtggaggtggcc
atcagcttcctgaaagagtgcggcctgaagctgaccgaggtctcgcctcgcggcatcaac
gccatattcgagcgtctgcgtaacatcctgcacgagtcagagatcgacaagcgcgtgcag
tacatgatagaggtgatgttcgccatcaggaaggatggcttcaaggaccacccgattatc
cctgagggcctggacctggtggaggaggaggaccagttcacacacctgcttcctctggag
gacgactacaaccaggaggatgttctcaatgtcttcaagatggaccctgactttctggag
aatgaagagaagtacaaagcgatcagaaaggagatcctggacgaaggcagctctgactcg
ggctcaggagacgaagctgacggcagtgatgaagaagagggcgacgaggaggaagaggcg
ggcgaagacgatcaagagaagatcaccatttttgacaagactgaagtgaacctggtcgcg
tttcgtcgcacgatatacctggccatccagtccagcttggattttgaagaatgtgctcac
aagttaataaagatggacttcccaaccactgcttcaaaagagctgtgcaacatgattctg
gactgctgtgcccagcagaggacctacgagaagttcttcggcctgctcgctgggaggttt
tgtctgctgaagaaagagtacatggagagtttcgaagccatattccaagagcagtacgag
accattcaccgcctcgagaccaacaaactgcgtaatgtggccagaatgtttgcgcatctc
ctgtacacagattccgtcccatggagtgtcatggagtgcatcaaagtcagcgaagacacg
actacgtcatccagccggatctttgtcaagattctgtttcaggagctgtgcgcctacatg
ggccttcccaaactcaacgagaggctgaaagatgttacattgcagtgcttcttcgagggc
ctctttcctcgagacaaccccagaaatacaagatttgccatcaacttcttcacctccatc
ggcctgggaggtcttacagatgagcttcgcgagcacctcaagaacgcccccaaaatgatc
atgacgcagaaccaggaggtgtcgtcggactcagactcctcctcttcctcttcagactcc
tcctcttcctcctcggacagcgagagcagcagcgacagcgagagcagctctgactcctct
agccagtcagactcctccagcagcagctcagattcagactccagacagaagcgcaaagag
cagagctccgggaggaaggacaagcgcccgggcaggatggcccgtacggaggagcgccac
gctgtgagacaggaggaacctcacggacccctggaccgtcgcagagagccccgccccagc
gaccacgaccgcagttcccaggaccgtgaccacaaccccaaggaccgagaccgcagcccc
aagggccgtgaccgcaaccgagaccgcaaccccaaggaccgagaccgcaaccccaaagac
agagaccgcgaccgagacttcagccccaagggccgagaccgcagccccaagggcagagac
cgcagccccaaggaccgagaccgcaaccctaagggccgagaccgtgaccgagacttcagc
cccaagggccgagaccgcagccccaagggcagagaccgcagccccaaggaccgagaccgc
agccccaagggccgagaccgcagccccaagggccgagaccgcagccccaagggccgagac
cgcagccccaagggccgagaccgcagccccaagggccgtgaccgcagccccaaggacaaa
gaccgcaaccccaaggacagagaccgcagtcccaaggacagagaccgcgaccgagacttc
ggccccaaagaccaagaccgcaaccccaagggccgcaaccgtgaccgcagccccaaggac
cgagaccgtgacttcagccccaaggacagagaccgcaaccccaagggccgagaccgtgac
cgcagccccaaggaccgtgatcagaaccggagtcccatagactgggaccgcaggcccaac
cgggaacagagtgaccgccagtcagatcccgccaagcggcaggacagggcgaaaaacggc
tcccaccccgagccggagcgagagagacggcagagccccgaagaccgccgcacggacagg
tcaccatctggagataggaggcgcaaggagacagaccccagggaggggcacaggaacggg
ctggagcggcgggcagagagagctgataaggagaacaggcatagagactcccgaaaggca
gagaggaacagcgacacctcccccaggaggaggagatag

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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