KEGG   Arthrobacter sp. QXT-31: BWQ92_03400
Entry
BWQ92_03400       CDS       T05056                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
arq  Arthrobacter sp. QXT-31
Pathway
arq03030  DNA replication
arq03410  Base excision repair
arq03420  Nucleotide excision repair
arq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BWQ92_03400
   03410 Base excision repair
    BWQ92_03400
   03420 Nucleotide excision repair
    BWQ92_03400
   03430 Mismatch repair
    BWQ92_03400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arq03032]
    BWQ92_03400
   03400 DNA repair and recombination proteins [BR:arq03400]
    BWQ92_03400
Enzymes [BR:arq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BWQ92_03400
DNA replication proteins [BR:arq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BWQ92_03400
DNA repair and recombination proteins [BR:arq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BWQ92_03400
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BWQ92_03400
   MMR (mismatch excision repair)
    DNA ligase
     BWQ92_03400
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BWQ92_03400
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia HHH PTCB-BRCT Zn_ribbon_3
Other DBs
NCBI-ProteinID: APX00897
UniProt: A0A1P8LYK4
Position
complement(721252..723540)
AA seq 762 aa
MSTPSGPTDNAATGTGAATDQLEPEAVPSESVRDEYENLADLVRKYRFAYYQEDEPLVSD
AEFDALFRRLEELEALHPELVSNDSPTQEVGGEVSAAFAAVEHLQRMYSLEDVFSIEELQ
AWIAKAEAGVAKSGNPQAAWLTELKIDGLAVNLLYRDGKLVRAATRGDGTTGEDITHNVL
TIKEIPQQLSGSGFPAEMEIRGEVFIPSKAFAEFNEALIEAGKAPLANPRNAAAGSIRQK
DPAETAKRPLQMFVHGIGAREGLQAASQSETYRLLAEWGLPVSPYFEVLGSPAEVLKFIE
KYGDKRHSLLHEIDGIVVKIDDFATQRALGYTTRVPRWAVAYKYPPEEVHTKLLDIAVNV
GRTGRVTPFGIMEPVKVAGSTVGMATLHNQDVVKAKGVKIGDIVVLRKAGDVIPEIVGPV
LALRDQQDPPVRDFVMPTECPSCGTPLAPGKEGDVDIRCPNAKSCPSQLRERVFHVASRG
AFDIEALGWEAAIALTQPTEPEVPPLVSEAALFDLTPEDLEPVKIRREKRSKGVPTGEFE
LVPYFYSKGTAKTPSKPTATTGKLFNELEKAKTQPLWRVLVALSIRHVGPRASRALANHF
GSMDAIRQASEEELAGVDGVGPTIAAALKEWFAEDWHVEIIDRWAAAGVRMKDERDESTP
RTLEGLTVVVTGTLEGFSRDEAKEAILVRGGKAAGSVSKKTDYLVAGDNAGTKLDKAEQL
GVPVLDEDGFRELLANGPAPAAEDEPDDPEATPAPQDQEDSE
NT seq 2289 nt   +upstreamnt  +downstreamnt
gtgagcacaccatcaggccccacagacaacgcagccacgggaaccggcgcagccacagac
cagcttgagccggaagccgttccctctgagtccgtacgggatgagtacgagaacctggcg
gaccttgtccggaagtaccggttcgcgtactaccaggaggacgagcccctcgtctccgac
gccgagttcgacgccctctttcgccggctggaggaactcgaggcgctgcatccggagctc
gtttccaacgattcgcccacccaggaggttggcggggaagtgtccgcggcatttgccgcc
gtcgaacatctccagcggatgtacagcctggaggacgtcttctccatcgaggaactgcag
gcctggatcgcgaaggcggaggccggggttgccaagtccggaaatccgcaggccgcctgg
ctgaccgagctgaaaattgacggcctcgccgtgaacctgctgtaccgggacggaaagctg
gtccgggccgccacgcgcggtgacggcaccaccggcgaggacatcacacacaatgtgctc
accatcaaggagatcccgcagcagctcagcggcagcggcttccccgcggagatggaaatc
cgcggcgaggtgtttatcccgtccaaggcgttcgccgaattcaacgaggcgttgattgag
gcagggaaggcgccgctggccaacccccggaacgccgcggccggctcgatccgccagaag
gacccggccgaaaccgccaagcgccctctgcagatgttcgttcacggcatcggcgcccgc
gaaggcctgcaggccgccagccagtccgagacctaccggctcctggccgagtgggggctg
cccgtcagcccctatttcgaggtgcttggcagcccggccgaggtgctgaaattcatcgaa
aagtacggggataagcggcacagcctgctccacgagatcgacggcatcgtggtgaagatc
gacgacttcgccacccagcgtgccctgggctacaccacgcgtgtgccgcgctgggccgtc
gcctacaagtacccgcccgaggaagtgcacaccaagctcctggacatcgccgtgaacgtc
gggcgcaccggcagggtcacgccgttcgggatcatggagcccgtcaaggtcgccggctcc
accgtgggaatggccaccctgcacaaccaggacgtggtcaaggccaagggcgtcaagatc
ggcgacatcgtggtgctgcgcaaggccggggacgtcatccccgagatcgttggcccggtg
ctggcgctccgggaccagcaggacccgcccgtgcgggatttcgtgatgcccacggaatgc
ccgtcctgcggaactccgcttgctcccgggaaggaaggggacgtggatatccgctgtccc
aacgccaagtcctgcccgtcgcagctgcgtgagcgggtgttccacgttgccagccgcgga
gcgttcgacattgaggccctcggctgggaggccgcgatcgcgctgacccagccgacggaa
cccgaggtcccgcctctggtcagtgaggcggccctgttcgacctgacgccggaggacctt
gaaccggtgaagatccggcgcgagaagcggtccaagggtgtgcccaccggcgagttcgag
ctggtgccctacttctacagcaagggcacggccaagacgccgtccaagccgacggccacc
accgggaagctgttcaacgagctcgaaaaagccaaaacgcagccgctgtggcgcgtgctg
gtggcgctgtccatccggcacgtcggcccccgcgcatcacgcgccctggccaaccacttc
ggcagcatggacgccatccggcaggcgtccgaggaggaactggcgggtgtggacggggtg
ggccccaccatcgccgcggcgctcaaggagtggttcgccgaagactggcacgtggagatc
atcgaccgttgggccgccgcgggggtccggatgaaggatgaacgggacgagtccacgccg
cgcaccctggaagggctgaccgtggtggtcacgggaaccctggagggcttcagccgggac
gaggccaaggaagcgatcctggtccggggcggcaaggcagcaggctcagtgtcaaagaaa
actgactacctcgtggccggcgacaacgccggcaccaagctggacaaagccgagcagctc
ggtgttcctgtcctggacgaggacggattccgcgagctgctggccaacggaccggcaccc
gccgctgaagatgaacctgacgatcccgaggcaacccccgctccgcaagaccaggaggac
tccgaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (13)   

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