Arthrobacter sp. TES: IG195_01620 Help Entry IG195_01620       CDS       T10985                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism artt  Arthrobacter sp. TES Pathway artt03030   DNA replication artt03410   Base excision repair artt03420   Nucleotide excision repair artt03430   Mismatch repair Brite KEGG Orthology (KO) [BR:artt00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     IG195_01620 (ligA)    03410 Base excision repair     IG195_01620 (ligA)    03420 Nucleotide excision repair     IG195_01620 (ligA)    03430 Mismatch repair     IG195_01620 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:artt03032]     IG195_01620 (ligA)    03400 DNA repair and recombination proteins [BR:artt03400]     IG195_01620 (ligA) Enzymes [BR:artt01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      IG195_01620 (ligA) DNA replication proteins [BR:artt03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      IG195_01620 (ligA) DNA repair and recombination proteins [BR:artt03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      IG195_01620 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      IG195_01620 (ligA)    MMR (mismatch excision repair)     DNA ligase      IG195_01620 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       IG195_01620 (ligA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH BRCT_2 Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  QOI65260 Position complement(352748..355009) Genome browser AA seq 753 aa AA seqDB search MATAAVAVEEGAPPSENLREEYQELVDLVRKYRYAYYQEDAPTVSDAEYDLLYRRLEELE ALHPELVANDSPTQEVGGEVSAAFAAVEHLQRMYSLDDVFSLDELEAWVRKVEASVAKLG DRVPPISWLTELKIDGLAVNLLYRDGKLVRAATRGDGTTGEDITHNVLTIKEIPRQLSGS GYPSEVEIRGEVFIPSKAFAEFNDSLVAAGKAPLANPRNAAAGSLRQKDPAETAKRPLSM FVHGIGAREGLDAASQSETYKLLGEWGLPVSPYSKVLDSYDGVLEFIAHYGEHRHGLLHE IDGIVVKIDDFATQRALGYTSRVPRWAAAYKYPPEEVHTKLLDIMVNVGRTGRVTPFGLM EPVKVSGSTVGMATLHNQDVVKAKGVMIGDIVILRKAGDVIPEIVGPVLALRDKQDPPVR EFVMPTECPSCGTPLAPSKEGDVDIRCPNGKSCPSQLRERVFHVASRGAFDIEALGWEAA IALTQPAEPEIPPLTSEAALFDLTREDLANVMIRREKKSKGVGTGQYELVPYFYTKATAK TPSKPTATTEKLFTELEKAKKQPLWRVLVALSIRHVGPTASRALATNFGSMDAIRNATEE QLAHVDGVGPTIAAALKEWFAVDWHNEIVDRWAAAGVRMEDDRDTATPRTLEGLTVVVTG TLPNFSRDEAKEAIIIRGGKAAGSVSKNTSYLVAGESAGTKLDKAEQLGIPVLDEDGFRE LLANGPAAPEGQPATSEGQENVDEAAAREGESE NT seq 2262 nt NT seq  +upstreamnt  +downstreamnt atggccacagccgccgtcgccgtagaggagggtgcgccgccgtcggaaaacctccgggaa gagtaccaggaactggttgacctggtccggaagtaccggtacgcgtattaccaagaagac gctcccactgtttccgacgctgaatatgacctcctgtaccggcgcctggaggaattggaa gccctccatccggagctcgtcgcgaatgattcacccacccaggaagtgggcggtgaggtc tccgcggcttttgccgccgtcgagcacctccaacggatgtacagcctcgatgacgtgttc tcgctcgacgagctggaggcctgggtgcggaaggtcgaggcgtcggtggccaagctcggg gacagggtcccgccgatctcgtggttgaccgagttgaagatcgatggcctggccgtgaac ctgctgtaccgggacggcaagctggtgcgcgctgctacccgcggcgatggcaccacgggt gaggacatcacccataacgtcctgaccatcaaggagatcccgcggcagctcagcggctcg ggctatccgtccgaagttgagatccgcggcgaggtcttcattccgtccaaggctttcgcg gaattcaacgactcgttggtggcagcgggcaaggcgccgctggccaacccccgcaacgcc gccgcgggttcgctccggcaaaaagatccggcggagaccgccaagcgtcccctcagcatg ttcgtccacggcatcggggcgcgtgaagggctggatgcggccagccagtcggagacctac aagctcctgggcgaatggggactcccggtcagtccctactcgaaggtcctggactcttac gacggcgtcctggaattcattgcccactacggcgaacaccgccacggcctcctgcacgag atcgacggcatcgtggtgaagatcgatgacttcgccacccaacgcgcactcggctacacc tcccgcgtgccgaggtgggccgccgcgtacaagtacccgccggaagaggtccacaccaaa ctgctggacatcatggtcaacgtcggccggaccggacgtgtcactccgttcgggttgatg gagcccgtcaaggtgtccggctccaccgtgggcatggctacgctgcacaaccaggacgtc gtcaaagccaaaggcgtgatgatcggcgacatcgtgattcttcgcaaagccggtgacgtc atccccgaaattgtcggtccggtactggcgctccgcgataagcaggatccgcccgtccgc gaattcgtcatgcccaccgaatgcccttcctgcggcactccgctcgcgccttccaaggag ggcgacgtggacatccgctgccccaatggaaagtcctgcccttcccagttgcgtgagcgg gtcttccacgtggccagccgtggggccttcgatatcgaggccctcggctgggaagcggct atcgctttgacccagcccgcagaaccggagattcccccgctgaccagcgaggccgcgctg tttgacttgacccgcgaagatctggcaaacgtgatgatccgccgcgagaagaaatccaag ggcgtcggcacaggccagtacgaactcgttccctacttctatacgaaagccacggccaag acgccgtcaaagcccactgccaccacggagaagcttttcacggagctggagaaagccaag aagcagcccctgtggcgggtgcttgtagcgttgtccatccgccacgtcggtcccaccgcc tcgcgggcactggcaaccaacttcggaagcatggatgccattcggaatgcgaccgaggaa caactggcccatgtggacggcgtcggaccgaccattgcggctgcccttaaggaatggttc gcggttgactggcacaacgagatcgtggacaggtgggctgccgccggcgttcggatggag gatgaccgggatacggctactccgcgcacgcttgaaggactgaccgtggtggtcacggga accctgccgaacttcagccgggatgaggccaaggaagccatcatcatccgtggtggcaag gcggcaggctcggtatcgaagaacaccagctatctggtggccggggaaagcgctggtacc aagctggacaaagcggaacagctcgggatcccggtgttggatgaggacggattccgtgag ctcctggccaatgggccagctgcgccggaaggtcagcccgccacgtctgaaggccaggag aacgtcgatgaagctgccgcgcgggaaggggaatccgaatga

All links   Gene (1) NCBI-PROTEINID (1) Protein domain (11) Pfam (11) All databases (12) Download RDF

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