KEGG T10152: 117291608

Luidia clathrata (European starfish): 117291608

Entry

117291608         CDS       T10152

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1

K13100

pre-mRNA-splicing factor CWC22

Organism

arun Luidia clathrata (European starfish)

Brite

KEGG Orthology (KO) [BR:arun00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arun03041]
    117291608
Spliceosome [BR:arun03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    117291608
Complex C
   U4/U6.U5 tri-SnRNP related factors
    117291608

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

117291608

NCBI-ProteinID:

XP_033629317

Position

6:complement(13865609..13890757)

AA seq 1513 aa
MLHKMGVHTNKASTRSPSSRKKRHSSSSSSSSSSSSSDSDSSGSDSSSSNSSSSSSSAAE
VVRHDRRRNSQDNVGRRRNEAVDNRGRRSSTGRRDNKEEEKTETLIAPRSPEEPPPETTS
RSQRKPPATTQRSPAQQDKGSTGSGHRSAEEDEEPMETLSIGKPSDDELSIGPDDKDMYQ
DLQEEEAREQQKKKKPSRPEAYNDSDEEEGQSDSDDSYSWRTDRVKSVLQSRIHKPDEGR
QRHRSASYEREDFEAGGMKSIVGTTIKRTAGHDSAESGEITGSDDEESESEKQKESSRGK
REKEEAPERSRRRRAEDGKRTHDAEHERRGRGSKGPLDRDEEQEYRDAERNFRKRRFHRT
QEESRHRRDEGPREPMREQREQRRPERAEKPEPEKEQPPEKRKRKETVDTPLQSKTGGAY
IPPAKLKLMQAQISDKSSLAYQRLAWEALKKSINGLINKTNVSNIGNIVQELLQLNIVRG
RGLLTRSIIQAQTASPTFTNVYAALVAIINCKFPQNGELVLRRLIINFKKGFRRNDKTMC
LSSTRFIAHLVNQQVAHEVIALEILTLLLENPTDDSVEVVVGFLKECGLKLSEVTPRGVH
AIFERLRNILHEAQIEQRVQYMVEVIFANRKDGFKDFPAIKEGLDLVEESEQYTHLLTLE
DNYEPEDLLNIFKEDPEYLDNEEKYKGIRKEILGEESDASGSDSDGDDESESDDEESDTE
AQEAAKMEIIDTTETNMIALRRTIYLTIQSSLDFEECAHKMLKMEFKPGQEKEVCLMILD
CCAQQRTYEKFFGLLAQRFCQLKREYVAQYEAIFPEQYETCHRLDTNKLRNVAKFFSHLL
HTDAISWTVLAAVKMNEEDTTSSSRIFIKILFQELSEYMGLPKMNTRLRDPTLQPYFEGL
MPRDNPANTRFSINFFTTIGLGGLTDDLRDHLKNYQRVIMQQQRPVQSDTSSGSGSSISS
DSDDSSSSSDSSSSSDSSDSSSSESEDKHPKRRKSAPQKHDKKEKPVRNRAAQLVEKPDR
HNRRQSESIDHREQIQNRSDRQEDSRRDRPNNVAYRRTRDDSEDEQTVHRNDRPKDRRRE
VQNSIPNRKTRDNSDDEDERAVRRNDRPKDRRREEQNFVQNRKTQEESDLKDRRHEVQSA
IQSRRNRRDSDGQDEPAERHNERPNRRREVQNSVPSRRNRDNSDSEDGRAVHRKDPPRDR
RGVVQNLVPSRRNRNGSNGEDGHAVRRNDPPRDKRREVQNSVPSRRNRGNSDGEDDRAVR
RNDRPKDRRGEVQNSLPRRRTRDNSDSDSDSESDSSSGSESGSSSSSSDESSPVRRNDRP
NERQRSTQNSIPNRRTRDDNDSKDRTKDRRREVQNPIPNRRPQTESDSDSEESPVRQRYD
EDRDLPRNGRKELDKPPRRDYDKSPPRSDKKSGRSDRPEIRREQSRRQRSDEIEDKENQR
DRDGRDARQSNKRSDFREDASVERRSSRKERDYAQRDSRDSSSIEREGSKYRRRQYSRSP
DERVRREQVRERR

NT seq 4542 nt +upstreamnt +downstreamnt
atgttacacaaaatgggagtacatacgaacaaagcgtcgacacggagtccaagcagcaga
aagaagagacacagcagcagtagcagcagcagtagcagcagtagtagcagtgattccgat
tccagtgggagtgactccagctcaagtaacagcagcagtagtagtagttccgcagcggag
gttgtccgccacgaccgtcgtcggaactcccaggacaatgttggaaggcgtaggaatgag
gcagtcgacaacagagggcgccgatcctcaacgggaaggagggataataaagaagaggag
aaaacggagacgttgatcgctccaaggagtcctgaagaacctccgcctgagaccacatct
agatcccaaaggaagcctccagcaaccactcaaagatcacccgcacaacaagataagggg
tcaacgggttcaggtcataggtcagcagaagaggatgaagagcctatggagactcttagt
atcgggaaaccgtctgacgatgagctctcaatcggtccagatgataaggacatgtatcag
gacttgcaggaagaggaagcaagggagcagcagaaaaagaaaaaacccagcagacctgaa
gcgtataacgacagtgacgaggaggaaggccaatcagatagcgatgatagctactcctgg
cgtacagaccgggtcaagtccgtcttacaaagccgcatccataagcccgacgaaggaaga
caacgacatcgatccgcatcctatgagagagaggactttgaagcggggggcatgaagagt
attgtgggcacaaccatcaagagaacagccggtcacgactcggctgagagcggggagatt
actggaagcgatgatgaggagtctgagagcgagaaacagaaggaaagtagcagaggcaag
agagagaaagaggaggctccagaacgctccaggcgtcgacgcgccgaagatggtaaaaga
acccacgatgcagagcatgagcggagaggtcgtgggagcaaaggtccactagacagagac
gaggagcaggagtaccgtgatgctgagcggaacttccgtaagagacgtttccaccggacg
caggaggagtctcgacacagacgggatgagggtccgagagagccaatgagagaacagaga
gagcagagacgccctgagcgagcggagaagcccgagccagagaaggagcagcccccagag
aagagaaagcggaaagaaacggtggacacgccccttcagagcaagacaggcggagcctac
atacccccggccaagctcaagctgatgcaagcacagatatcggataaatctagtcttgca
taccagcggttggcatgggaagccctgaagaagagtattaacggcttgatcaacaagact
aacgtttccaacatcggcaacattgtccaagaactgctgcagctgaatatcgtcagagga
aggggtttgttgactcgctccatcattcaagcgcagacagcctctccgacgttcactaat
gtgtatgcagctcttgttgcaatcatcaactgcaagtttccccagaatggtgagctagtt
ctccgtcgcctcatcatcaatttcaagaagggattccgtcgtaatgacaagactatgtgc
ctgtcgtcaacacgcttcattgctcatttggtcaaccagcaagtagcccatgaagtgatc
gctctggagatcttaaccctgctccttgagaatcccactgatgatagcgtcgaggtcgta
gttggattcctcaaggaatgcggcctcaaattgtcggaggtcacaccaagaggcgttcac
gcgatttttgagcgtctgcgtaacatcctccacgaagcccagattgaacagcgtgtccag
tacatggtggaagtcatcttcgctaatcgtaaagatggattcaaagacttccctgccatc
aaggagggtcttgatcttgttgaagagtctgagcagtacacccatctcctgacgcttgaa
gataattacgaacccgaagatctactgaacatcttcaaggaggatccagagtacctggac
aatgaggagaaatataaagggatccgtaaggagattcttggagaggagagcgacgcctcg
ggatcagactctgacggagacgatgaatcggaaagcgacgacgaagagtcggacactgaa
gcacaagaagcagcaaagatggagatcatagacaccacagagaccaacatgatagcgttg
cgtcgtacgatctacctgactatccagtctagtctggactttgaagaatgcgctcataag
atgctcaagatggaattcaaaccagggcaggagaaagaggtttgcttgatgattctcgac
tgttgtgcccaacagaggacctacgagaaattcttcggtcttctagctcagaggttctgc
cagctgaagcgtgagtacgtcgcgcagtacgaggcaatatttccagagcagtacgagacg
tgtcatcgtttggacaccaacaagctccgtaacgtcgctaaattcttctcccatctactc
cataccgatgccatatcctggacggttcttgctgcagtcaagatgaacgaagaagacaca
acctcctccagtcgtatcttcattaagatcctcttccaggagttatccgaatacatggga
ttacccaagatgaacactcggctgagagacccgactttgcagccgtactttgaaggcttg
atgccgagggacaacccagccaacacaagattctctattaactttttcaccaccatcgga
ctcggtggtctcacggatgacttacgagaccatctgaagaactaccagcgagtgataatg
cagcagcaacgtccagtacagagtgataccagctctgggagtggcagcagcatctccagt
gactctgacgattcctccagctcaagcgattcaagcagtagcagtgattccagtgacagc
agtagctcagagagtgaggataaacacccaaaaaggagaaaatctgcaccgcagaaacac
gacaagaaagagaaacctgtgcgcaatcgtgcggctcaactcgtcgagaaacctgaccga
cacaatagacggcagagtgaaagcatcgaccatagagaacagatccaaaacagaagtgac
cgtcaagaagacagtcggcgagatagaccaaacaacgtcgcatacagacggactcgtgat
gatagtgaagatgagcaaactgtacaccgtaatgaccggcctaaagacagacgacgtgag
gtgcagaattccatcccaaaccgtaagactcgagataatagcgatgatgaagatgagcgt
gctgtacgccggaatgaccgtcccaaagacagacggcgtgaggagcagaattttgtgcaa
aaccgaaagactcaagaggaaagcgacctaaaagacaggcgacatgaggtgcagagtgcc
atccagagtagacgaaatcgcagagatagcgatggtcaggatgagcctgccgaacgccat
aatgaacgtccaaacagaaggcgcgaggtgcagaattccgtcccaagcagacgaaatcgt
gacaatagcgatagtgaggatggtcgtgctgtgcatcgtaaagatcctcccagagacaga
cgaggtgtggtgcagaatttagtcccaagcaggcgaaatcgcaacggtagcaatggtgag
gatggtcacgctgttcgtcgtaatgacccccccagagacaaacggcgagaggtacagaat
tcagtcccaagcagacgaaatcgaggtaatagcgatggcgaagatgatcgggctgtacgg
cgtaacgaccgtcccaaagacagacggggtgaagtacagaattctctcccaaggagacga
acaagagataacagcgatagcgatagtgatagtgaaagcgacagtagtagtggtagtgaa
agtggtagtagtagtagtagtagtgatgaaagctctccggtccgcagaaatgaccgtcca
aatgaaagacaacgtagcacacagaactctatccctaacagacgaacaagagatgacaac
gatagtaaagaccgtacgaaagacagacgccgtgaggtgcagaatcctattccaaacaga
cgaccacaaactgagagtgacagcgatagcgaagagtctcctgtgcgtcagcgttacgat
gaagatcgtgatttaccccgaaatggtcgaaaagaattggacaaaccccctaggagagac
tacgataagtcacccccaaggtcagacaaaaagtcaggtcgaagcgaccgccctgaaatc
agacgcgaacagagcagacgccagcgatccgatgaaattgaagataaagagaatcagcgg
gatcgagatggtcgagatgcgagacaatccaacaaaagatccgatttcagagaggatgcg
tccgtcgagaggcgaagctcacggaaggagagggactatgcgcagagagactcaagagac
tcgtccagcattgagagggaaggaagtaaatatcgcagacgccagtacagccgctcacca
gacgagagagtccgacgtgaacaagttagggagaggcgctga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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