KEGG   Acipenser ruthenus (sterlet): 117401700
Entry
117401700         CDS       T07327                                 
Symbol
tnnc1b
Name
(RefSeq) troponin C type 1b (slow)
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04020  Calcium signaling pathway
arut04260  Cardiac muscle contraction
arut04261  Adrenergic signaling in cardiomyocytes
arut04814  Motor proteins
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    117401700 (tnnc1b)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    117401700 (tnnc1b)
   04820 Cytoskeleton in muscle cells
    117401700 (tnnc1b)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    117401700 (tnnc1b)
   04261 Adrenergic signaling in cardiomyocytes
    117401700 (tnnc1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:arut04812]
    117401700 (tnnc1b)
Cytoskeleton proteins [BR:arut04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     117401700 (tnnc1b)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EH SPARC_Ca_bdg DUF5580_M FCaBP_EF-hand Dak2 EMG1 CmlA_N
Other DBs
NCBI-GeneID: 117401700
NCBI-ProteinID: XP_033858393
Position
51:complement(2680697..2696008)
AA seq 161 aa
MDDVYKAAVENLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELTEM
IDEVDEDGSGTVDFDEFLVMMVRCMKEESKGKSEEELAELFRMFDKNCDGYIDLEELKMM
LEETGETITEDDIEELMRDGDKNNDGKIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgatgtgtataaagcagcggttgagaacttgactgaagagcagaagaatgagttt
aaggctgcgttcgatatctttatccaggatgcggaggacgggtgtatcagtaccaaggag
ctggggaaggtgatgaggatgctgggacagaaccccacaccagaagagctgacagagatg
atagacgaggtggatgaggatggcagtggcacggtggatttcgatgagttcctcgtcatg
atggtgaggtgtatgaaggaggagagtaagggcaaatcagaggaggagctggctgaactc
ttcagaatgttcgacaagaactgcgacggctacattgacctggaggagctgaagatgatg
ctggaggagacgggagagaccatcactgaggacgacatcgaggagctgatgagagacgga
gataaaaacaacgatggcaaaatcgactacgacgaattcctggagttcatgaagggagtg
gaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system