KEGG   Acipenser ruthenus (sterlet): 117412951
Entry
117412951         CDS       T07327                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117412951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117412951
Spliceosome [BR:arut03041]
 Complex B
  Other components
   Prp19-related factors
    117412951
 Complex C
    117412951
SSDB
Motif
Pfam: STL11_N RRM_1 zf_CCCH_4 Torus RRM_occluded zf-CCCH_2 Nup35_RRM_2 zf-CCCH zf-CCCH_4 zf-CCCH_3 zf-CCCH_10 RRM_3 Ribonuclease_3
Other DBs
NCBI-GeneID: 117412951
NCBI-ProteinID: XP_033877499
Position
15:complement(28351096..28358641)
AA seq 423 aa
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDTSLSIKDDMPKSDVNKEFYTQN
MEREIQNSDGTRAVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSISTLYVGGLG
DTVTETELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIINGRRLTV
KWGRSQAARGKEKEKDGVTEAGMRLEPVPGLPGTLPPPPVAEEEAPANYFNLGPNPSPSV
MNIALPPPPGIAPPPPPGFGPAMFHSMGPPPPPPQFMRAPGPIHYPSQDPQRMGAHANRH
GNS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcgacgtcgttgggagctaacacttacaataggcaaaactgggaagacgcggacttc
cccattctttgccaaacatgcctaggagaaaatccctatatccgcatgacgaaagagaaa
tatggcaaggagtgcaagatctgtgccagaccttttacagtgtttcgctggtgcccaggg
gtgcggatgcgcttcaaaaaaacagaagtgtgtcagacatgcagcaaactgaagaacgtg
tgtcagacctgtctgttggatctggaatatggtttgccaatccaggttcgtgacacaagt
ctgtccatcaaagacgacatgccgaaatcggatgtcaataaagagttttacactcagaac
atggaaagagagattcagaactctgatgggacaagggcggttgggttactggggaaggca
ccgagctccagtgacatgctgctgaaactggcaaggaccaccccttactacaaacgtaat
cgaccccacatctgctccttctgggtgaaaggagagtgtaagagaggagaagagtgtccc
tacaggcatgagaagccaacagacccagatgaccccctggcagaccagaatattaaagac
cgttattatgggatcaatgaccctgtggcagacaagcttcttaaacgagcctcaaccatg
ccacgtctagacccgcctgaagacaaatccatctcaaccttgtatgtgggcgggctggga
gacactgttacagagaccgagctcaggaatcacttttaccagtttggagagattcgcacc
acaacaatagtgcagaggcagcaatgtgcatttattcagtttgctacaagacaagcggct
gaacttgctgctgaaaaatccttcaacaaattgattatcaatggccgcaggctcacagtc
aagtggggcaggtcccaggcagcgagaggaaaggagaaagaaaaggatggcgtcacagag
gctggcatgagattggagccagtaccaggtcttccaggaaccctgccccctccccctgtt
gcagaggaagaggctccagcaaattacttcaaccttggtccaaatccatctccatcagtg
atgaacatcgccctgccacccccaccaggcattgcaccccctcctcctccaggttttgga
cctgccatgttccactcaatgggcccacccccacctccccctcagttcatgagagcccca
ggtcccatccactacccttcccaggatccccagcgaatgggcgcccatgccaacagacat
gggaattcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (17)   

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