KEGG   Acipenser ruthenus (sterlet): 117413994
Entry
117413994         CDS       T07327                                 
Name
(RefSeq) integrin alpha-V-like
  KO
K06487  integrin alpha V
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04081  Hormone signaling
arut04145  Phagosome
arut04148  Efferocytosis
arut04510  Focal adhesion
arut04512  ECM-receptor interaction
arut04514  Cell adhesion molecules
arut04810  Regulation of actin cytoskeleton
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    117413994
   04512 ECM-receptor interaction
    117413994
   04514 Cell adhesion molecules
    117413994
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117413994
   04148 Efferocytosis
    117413994
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117413994
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117413994
   04810 Regulation of actin cytoskeleton
    117413994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arut04131]
    117413994
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117413994
   04515 Cell adhesion molecules [BR:arut04515]
    117413994
   04090 CD molecules [BR:arut04090]
    117413994
Membrane trafficking [BR:arut04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    117413994
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117413994
  Exosomal proteins of epithelial cells
   117413994
Cell adhesion molecules [BR:arut04515]
 Integrins
  Integrin alpha subunits
   117413994
CD molecules [BR:arut04090]
 Proteins
  117413994
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha LYRIC
Other DBs
NCBI-GeneID: 117413994
NCBI-ProteinID: XP_033879427
Position
10:36716597..36741749
AA seq 1042 aa
MERRSRESCVSFCLVLLFIFRCASFNLDTDSPSVFLGPDGSYFGFSVDFFKPDEKQLNVL
IGAPKANTSHSKIVERGAVYSCPWQSSSTCQQVQFDNTDDRYNPNGEQMEFKSNQWFGAT
VRSKGDQILACAPLYQWRTFGTAEREPVGTCYLKKGNTIVEYSPCRTDKNNPEGQGFCQA
GFSIDFVKDNRVVVGGPGSFYWQGQLISDLIPQIVNKYNKDSYYTLYDSQLTTKPASAAF
DDSYLGYSIAVADFNGDGIDDFVTGVPRGARALGYVTIFSGTTMESLVNFTGEQMAAYYG
HSVAAVDINNDGLADLFSGSPLFMDRGSDGKLREVGQVYVYLRDSPVSFTKKTQKLTGAE
IYARFGSCVAPLGDLDLDGFNDIAIAAPYGGTDNQGLVYIYNGRASGLNPTHSQVLEGKW
ASTSMPPSFGYSMHGATDIDLNGYPDLIVGVFGADKAVLYRARPVISVNATLDITPPILN
PDEKKCTLPGSSVTVSCFNVKFCLKAHGKGAPTTLNFQVELLLDKLKQKGAIKRVLFLHN
RLSSHTKNMSVTNGKGPACEELDAYLRDETEFRDKITPITIFMEYSLDYKTAADETGLLP
ILDQFTPANITKQAHILLDCGEDNICKPELKLSVKSDQTQIYIGDDNPLTLEVTAENRGE
GAYEAELYVYMPPQADFIGVVRNSEKLSRLSCAYKTENQTRIVVCDLGNPMKAGTNLVSG
LRFSVHQLSEQDTSVKFDLKIQSSNLFENTSPVVSSLTTLAVLAKVEIRGVSTPHQLFLP
IANWQPKENPMIEDDIGPLVQHIYELRNNGPSTFSKAILDLEWPYKYKNESLLYIIQYEI
EGPMKCTTDMEINPLNITMPKAPETNDTTREDSRDDGRNRNRRDLGPVEGELETLGCGKA
ECLKIKCQVGRLERGKSAILYIRSRLWAATFMKNENQNHSYTLKSSATFNVIEMPYKNLT
YDYPSNYTLVNTSIIWVKPDSAQPVPGWVIALAVLAGLLLLGLLIFVMYKVGFFKRVRPP
QEDGTEKEQLQPQENGDGGAEA
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggagcgacgtagtcgcgaatcttgtgtatcgttttgtctggttttgttgttcattttt
cgctgtgcttctttcaatttggatacggacagtccttctgtttttttgggacccgatgga
agttattttggcttctcagtggatttcttcaagcctgacgagaaacagttaaacgtttta
attggtgctcctaaggccaatacttcacattcaaaaattgtggagaggggggcagtgtac
agttgtccatggcaatcaagcagtacctgtcagcaagtgcaatttgacaatacagatgac
cgatacaatccaaacggtgagcagatggagttcaagtcaaaccagtggtttggagccacc
gtgagatctaaaggtgatcagattttggcctgtgctcctctataccaatggagaacattt
gggacagcagaaagagagcccgtagggacctgctacctaaaaaaggggaataccattgtt
gagtattcaccttgcagaacagataaaaacaatccagaaggacaaggtttttgtcaagca
ggatttagcattgactttgtaaaggacaatcgcgttgttgttggagggcctggtagtttt
tactggcaaggtcaactgatttctgatctgattcctcagattgtgaataaatataataag
gattcctattacacattgtatgatagtcaactgactaccaagccagccagtgctgcattt
gatgacagctacttaggctattcaatagctgttgcagactttaatggcgatggaatagat
gattttgtgactggtgttcccagaggagctcgagctcttggttatgtgacaattttcagt
ggcacaactatggagtccctcgttaatttcactggagagcagatggcagcttactacggg
cattctgttgctgctgttgacattaataatgatggccttgcagatctctttagtggatcc
cctctcttcatggaccgtgggtctgatgggaagctccgagaggttggtcaggtgtacgtc
tatctgagggacagcccagtctccttcacaaagaaaacacagaagctgacgggcgctgag
atctacgctagatttggcagctgtgttgcacccctcggggacctcgatctcgatggcttt
aatgatattgcaattgctgctccttatggagggacagacaaccaaggtcttgtctacatc
tacaatggacgtgcttcaggactaaacccaacacactcccaggtcctggaagggaaatgg
gcttccaccagcatgccacccagctttggatactccatgcacggagccacagatatagat
ctgaatggatacccagatctgattgtcggtgtttttggagctgataaagctgtcctgtac
agagctaggccagtaattagtgttaatgccaccttggatatcacccctccaatcctcaac
ccagatgagaagaagtgcactttgcctggttcatccgttacagtatcttgttttaatgta
aaattctgcttaaaggcacatgggaaaggagcccccaccaccctcaactttcaggtggag
ttacttttagacaaactcaaacagaaaggagctataaagagggtactgttcctacacaac
aggctgtcctcccatacaaaaaacatgtctgtaacaaatggcaagggacctgcctgtgaa
gaacttgatgcttatttacgagatgagacagagttcagagacaaaattacaccaatcact
atcttcatggaatatagcttggattataaaaccgctgcagatgaaacaggtctcttgcca
attctggaccagtttactccagctaatatcaccaagcaggcacacattttactggactgt
ggtgaggataatatatgtaaaccagagctgaagctgtcagtaaaaagtgaccaaacgcag
atatacattggcgatgacaaccccctgacacttgaggtaactgcagagaacagaggagag
ggagcctacgaagctgagctctatgtgtatatgccaccccaagctgactttatcggtgtg
gttcgaaacagtgagaagttatcaagattgtcttgtgcatataagacggagaatcagact
cgtatagttgtctgtgaccttggaaatccaatgaaagctggaacaaatcttgtgtctggt
ctgcgattcagtgttcatcagctgtctgaacaggacacttcagtgaagtttgatttaaaa
atccagagttccaacttatttgaaaacaccagtcctgtggtatccagtttgactactctt
gctgtgctagccaaagttgaaataagaggagtttccacccctcaccagctctttcttcct
attgctaactggcagcccaaagaaaacccaatgatagaggatgacatcggaccgcttgtc
cagcatatctatgagctacgaaacaatggcccaagtaccttcagtaaggcaatactagac
ctggagtggccttacaaatacaaaaatgagtccctgctttatattattcaatatgaaatc
gaaggacctatgaaatgtaccacagatatggaaatcaaccctctgaatataacaatgcct
aaagctccagaaacgaatgatactacaagagaagattcccgggatgatggcagaaaccgc
aaccgtcgtgaccttggacctgtcgaaggggagctggaaactttgggctgtggcaaagca
gagtgtctgaaaatcaagtgccaagttggccgcttggagagaggaaagagtgccatcctg
tacatcaggtcgagactgtgggctgcaaccttcatgaagaatgaaaaccaaaaccattca
tacactctgaagtcttcagcaaccttcaatgtgatagaaatgccttataagaaccttaca
tatgattatccctctaattacacactggttaacacctctattatctgggttaagccagat
tcagcacagccagtcccaggctgggtcattgcactagcagtccttgcagggctcctgctt
ttgggcttgttgatctttgtgatgtacaaggttggcttcttcaaacgtgtgcgcccccca
caggaagacggcacagaaaaagaacaactacagcctcaggagaatggagatggaggtgca
gaggcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system