KEGG   Acipenser ruthenus (sterlet): 117417031
Entry
117417031         CDS       T07327                                 
Name
(RefSeq) transcription initiation factor IIB-like
  KO
K03124  transcription initiation factor TFIIB
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117417031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arut03021]
    117417031
Transcription machinery [BR:arut03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     117417031
 Prokaryotic type
  Archaeal type
    TFB
     117417031
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cyclin_N Cyclin_C KIF9 Sigma70_r4 RB_B BRF2-like_C_cyclin_rpt
Other DBs
NCBI-GeneID: 117417031
NCBI-ProteinID: XP_033884577
Position
11:38632376..38641441
AA seq 318 aa
MASTIRGDALALPKVQCPNHPEALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSND
KAAKDPSRVGDAQNPLLNGGDLSTMISKGTGSASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITNMSDRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcgtcgactatccgtggtgatgctctagcccttcccaaagtgcaatgtccaaaccat
ccagaagcacttttggttgaagactaccgagctggagatatgatctgcccagaatgtgga
ctggttgttggtgacagagttattgatgttggatcagagtggagaacatttagcaacgac
aaagcagcaaaagatccgtctcgagttggtgatgcccaaaacccacttttaaatggagga
gatttgagtacaatgatcagcaagggaacaggttcagcaagttttgatgagtttggcaac
tcaaagtaccagaaccgcagaactatgagcagctccgacagagcgatgttaaacgcattt
aaggaaatcaccaacatgtcggacagaataaacctccccagaaatatcatagatcggaca
aataacttatttaagcaagtgtacgagcagaagagcctgaagggaagaagtaatgatgca
attgcttctgcttgcctttatattgcctgtagacaagagggtgttccacggacatttaaa
gaaatttgtgcagtctccagaatttctaaaaaagaaattggccgatgtttcaagctgatc
ctgaaggcacttgagacgagcgtggacttgataacaactggagacttcatgtccagattc
tgctccaacctggggttgcccaagcaagtgcaaatggctgctacctatattgcaagaaag
gctgttgagctcgacctggtacctggcaggagccctatctctgttgcagcggcagccatc
tacatggcatcacaggcctctgcagagaagaagactcagaaagaaatcggagacattgca
ggtgttgctgacgtcacaatcaggcagtcatacagactcatctatcctcgagctgcagat
ctctttccaccagactttaaatttgacacccctgtagataaacttccccagctgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (12)   

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