KEGG   Acipenser ruthenus (sterlet): 117424696
Entry
117424696         CDS       T07327                                 
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
  KO
K05648  ATP-binding cassette, subfamily A (ABC1), member 5
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    117424696 (abca5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:arut02000]
    117424696 (abca5)
Transporters [BR:arut02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    117424696 (abca5)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 R1_ABCA1 RsgA_GTPase AAA_29 AAA_23 MMR_HSR1 RH1
Other DBs
NCBI-GeneID: 117424696
NCBI-ProteinID: XP_033897219
Position
17:30035692..30056919
AA seq 1660 aa
MLPVKLRDAGVWQQTKSLLYKNLLIKWRTKQQSLQELILPLLLLGLLILISTLHPHAYYH
GISTVELERQYSYDPEPKYLGYTPNNTITNHIMDKVAEHLTNEGIEVEMFHSEKALENAS
LHDQSSWVGVVFQNSLSYQLRFPYNSVPLPSDYTDSIASCFTDSKSCKAANYWYSGFIKL
QSYIDAAIIEVQTQQEVWREMEGLRVVMMGQPGSVEVQKFPHALISIYLVLAFTPFVSFL
IVNVAAEKECRLKDAMAMMGLHDSAFWLSWGLLYAALVSTMSVLMAIISTCTSLFPSSSF
FVIFLLIFLYGISTIFFSFMLTPLFKKPKFASTVGSMLTVVFGCLSLFTVLMKDFPQPLV
WVLCLLSPSAFSMGIAQVVYLEAQGDGAVFSTLSNGPHPLFVPLVMLVLDSFLYLLLAVY
LDQVLPREYGLRRSILYFLKPSYWSRHMKHYKEVSSRFESEVNGVSPSSESVEPVSSEFQ
GKEAIRINNIHKVYKEKDSSVEALRGLTFDIYEGQITALLGHSGAGKSTLMNILCGICPP
TEGSAMIYGSPVSEMAEGLEMRRLVGICPQFNIMFEVLTVEEHLRIFAAIKGIPPGDINR
EVAKVLKDLDLEKIMDAQAKNLSGGQKRKLSVGIAILGDPKILLLDEPTAGMDPCSRHQV
WSLLKSRRSDHVTVLSTHYMDEADILADRKAVISQGLLKCIGSSLYLKIKCGVGYHLRMS
VNESCDTDRVTSLIRQHVSKAQLSRQQEAELTYTLPFENMDTFSGLFSELDSQPDLGIGN
YGVSMTTLEDVFLKLEAEAEVDQADYSVFNQEQVEEEGDASSLGDTDQRLLIFSDSKSEG
VSGHALWRQQFRTIARLHLLNLQRERKPIILALFIIFLASVLALSLISGNIRINATSRRL
SPDLYLLSSKQPFRKYASSLLLHNATDSSIDDFIRNVESQDIKVELQKGNDFMASAPHSA
AFNISGSNKQHCEYTAVFNSTTVHSLPMLLNVLSNALLRSFNGTGHIETWSKPFEFKIPE
ALSNALIYIEAVLLGMLAAGMPAYFAMEHTRDREIKCRSQLRISGLVPSAYWCGQAAVDI
PFYYLILIAMTSTLFAFHSEELLHAGAYTSVIPCLIGYGPAMILFTYVVSFMFTRVQNNR
DFLSIVSMLVCVVSAFLIQLTYVNGNQIVATILHNSLCFFNPLYPLMGCLNCITKKTFTD
MSVYEDTGTLSRNMLVTIVSPYLQCIFLLFLLRWLEIRYGGKTIKNDPLCRISSGKTKVH
RNPDESDNEDEDVQAERTRVKEALSCQTCEEKPVVVVSSLRKEYSTRHDGFILNTKKKKV
ATRNISLCVRKGEVLGLLGPNGAGKTTTMYMLAGETEPTAGQVLMGDYCTEFRQVDSTLE
YIGYCPQVNPLWPKITLQEHLEIYASIKGLGQNEVAGIIKRVVNALELKEHLKKKAKNLS
AGIKRKLCFALSMLGNPQIVLLDEPSTGMDPKAKQRMWRAIRAAFKNRQRGAILTTHYME
EAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRGYSLEVKLREEMTGLREVALLHKEILRI
FPHAVRQESFATLMVYKIPMEDVKSLSESFSQLEKAKDSFHFEEYSFSQSTLEQVFMEFA
KEQENDEEEIGSLSTTFQWQRLQQDEPVSTLHSDSIVHQL
NT seq 4983 nt   +upstreamnt  +downstreamnt
atgttaccggtaaaactgagagatgccggggtctggcagcaaactaaaagcctcctatac
aaaaacctgcttattaaatggaggaccaaacagcagagtctgcaggagctgatcctgccc
ttgctgttgctggggctcctgattctcatcagcacactgcacccccatgcctattaccat
ggcatctccaccgtggagctggagcgccaatacagctacgacccagagccgaaatacctg
ggatacacgcccaacaataccattaccaatcacattatggacaaggtggcggaacattta
actaacgaagggattgaggtggagatgttccacagcgagaaggccttggagaatgccagc
ctgcacgatcagtcatcctgggtgggtgtggtgttccagaactcgttaagctaccagctg
cgctttccctacaattctgtgccactgcccagcgactacacagactcaatcgccagctgc
tttacagacagtaaatcgtgcaaggctgcaaactactggtactctggattcatcaaactc
cagtcatacattgatgcagccattatagaggtgcagacccagcaggaggtctggagggag
atggaggggctacgggtcgtgatgatgggccagcctgggtcagtggaggtccagaagttc
cctcacgcactcatctccatctacctggtcctggcgttcacgcccttcgtgtccttcctc
atcgtcaacgtggcggcggagaaggagtgccgcctgaaggatgccatggccatgatgggg
ctgcatgactctgcgttctggctgtcctggggcttgctgtatgctgccctggtctccacc
atgtcagtcctcatggcaatcatctccacatgcacctccctctttcccagcagtagcttc
tttgtgatctttctgctcattttcctgtacgggatatccacaatcttcttttcgttcatg
ctgacacccctcttcaaaaagcccaagttcgccagcactgtgggctccatgctgacagta
gtgttcggctgcctgtctctcttcactgtcctgatgaaggatttccctcagccgctggtc
tgggtgctgtgtttgctgtctcccagtgccttctccatgggcattgcacaggtggtgtac
ctggaagctcagggagacggagcagtcttctccactctgtccaatggcccccaccccctt
ttcgtgccccttgtcatgctggtgctcgatagcttcctctacctcctgctagcagtctac
ctggaccaggtcttaccaagggaatatggactacgtcggtccatcctctactttctgaag
ccgtcctattggtccagacacatgaagcactataaagaggtcagttcgcggtttgagagt
gaggtaaacggcgtctctccgtccagcgagtcagtcgagcccgtgtcttcagagttccag
gggaaggaagccatcagaattaacaatattcataaagtttataaggagaaggacagttct
gttgaggcacttagaggtttgacgtttgacatctatgagggacagatcacagccctgctg
gggcacagcggagcggggaagtccacgctgatgaatattctgtgtgggatctgccctccc
actgaaggctctgccatgatctatggctccccagtgtctgagatggcagaggggctggag
atgcggaggctggtgggaatctgcccgcagttcaacatcatgttcgaggtgctgactgtg
gaggagcacctgaggatctttgctgccatcaagggcatccccccgggtgacatcaacaga
gaggtagccaaagtgttgaaggacttggatctagagaagatcatggacgcccaggccaag
aacctgagcggcggccagaagaggaagctgtctgtgggcattgccatcctgggggacccc
aagattcttctcctggatgagcccacggcaggaatggacccctgctcccggcaccaggtg
tggtctctgctgaagagtcggcggtcagatcatgtcactgtactctccacccactacatg
gacgaggctgacattctggcagatcggaaagctgtgatctcccaaggactcctcaagtgt
attggctcctctctctatctcaaaattaaatgtggggttggctaccacctccgaatgtca
gtgaatgagtcgtgtgacacagaccgcgtgacctcattgatcagacagcatgtctctaag
gcacagttgtcacggcaacaggaggcggaactgacatacactcttccctttgaaaacatg
gacacgttctcaggcctgttctcagagctggacagccagcctgatctcggaatagggaac
tatggtgtttccatgacaacactggaagatgttttcctgaagctggaggctgaggccgag
gttgatcaagcagactacagcgtgtttaaccaggagcaggtggaggaggaaggggacgcc
tcctccttgggcgacactgaccagcggctcctcatcttctctgacagcaagtctgagggc
gtctctggacatgctctgtggaggcagcagttccgcaccatagccagactgcacctgctc
aacctgcagagggagagaaagcccatcattctggctctgttcattatctttctggcctca
gtgctggctctgtccctgatcagtggcaatatccgaatcaacgccacgtcccgtcggctc
tccccagacctctacctcctcagcagcaaacagccgtttcgcaagtacgccagcagcctg
ctgctgcacaatgccaccgactcgagtattgacgacttcatccgcaatgtggaatcacag
gatattaaggtggaattgcagaaaggaaatgatttcatggcaagtgctccacatagtgct
gcctttaacatttcaggttccaataagcagcactgcgagtacacagctgtgtttaacagt
accacggtacactcccttcctatgctgctgaatgtcctaagcaacgccctgctgcgcagc
ttcaacgggaccggccacatcgagacgtggagcaaaccctttgaatttaaaattcctgag
gctctatcgaacgccctgatctacattgaagcggttctgttgggaatgctggcagcagga
atgccagcctactttgccatggaacacacacgggaccgcgagattaagtgccgttcccag
ctgcgaatctcaggcttggtcccatctgcatactggtgcggtcaggctgctgttgacatc
cccttctactacctcatcctgatcgccatgaccagcactctcttcgccttccactcggag
gagctgttgcacgccggcgcgtacacatcggtgatcccgtgtctgataggctacggtccg
gcgatgatcctcttcacctacgtggtgtccttcatgttcactcgcgtccagaacaatcgg
gatttcctctccatcgtctccatgctggtctgtgtggtatctgcattcttgattcagctg
acctatgtgaatggaaaccagatcgtagccacaattctgcacaactctttgtgcttcttc
aacccactgtacccactcatgggctgcctcaactgcattaccaagaagactttcactgac
atgagtgtttatgaagacactggaacgctgagtagaaacatgctggtaaccattgtatcg
ccctacctgcagtgcatctttcttctcttcctgctgcgttggctggagatccgatacgga
ggcaagactataaagaacgatcctctatgcaggatctcctctgggaagacaaaagtccat
aggaaccctgacgagtcagataacgaggacgaagatgtccaagcagagaggacgagggtc
aaggaggcactgagctgtcagacctgcgaggagaagccagtggtggtggtgagcagcctg
aggaaggagtacagcacccgtcatgacggtttcatcttgaacaccaagaagaagaaagtg
gcaacaagaaacatctccctctgcgttcgcaaaggtgaagtgctgggactgctgggtccg
aatggagcagggaagaccactaccatgtacatgctggctggagaaacagagcccacggca
ggacaggtgctgatgggtgattactgcacagagttccggcaggtggacagcaccctggag
tacatcggctactgtccacaggtgaacccgctgtggcccaagatcactctgcaggagcac
ctggagatctacgcctccatcaaggggctcggccagaatgaggtcgccggcatcatcaag
cgcgttgtgaatgcactggagttgaaagaacacctcaaaaagaaagccaagaatctctcg
gcaggaattaagagaaagctctgttttgccttgagcatgctgggtaaccctcagattgtg
cttctggatgaaccttcaacaggaatggaccccaaagccaagcagaggatgtggagagct
atccgtgcagcattcaagaaccgccagcggggggcgatactcaccacccactacatggag
gaggcggaggctgtgtgtgaccgagtcgccatcatggtgtcagggcagttgcggtgtatc
ggctccatccagcacttgaagggaaagtacggccgtgggtacagcctggaggtgaagctg
cgggaggagatgacaggactgcgggaagtggctctccttcacaaggagatcctgagaatc
ttccctcatgcagtgcggcaagagagctttgccactctgatggtgtataagatccccatg
gaagatgtgaaatcactctcagagtccttttcacagttggaaaaggcaaaagattccttc
cattttgaggaatacagcttctctcaatctacactggaacaggtgttcatggagtttgct
aaagagcaggagaatgacgaggaagagattgggtccctgagcacaacgtttcaatggcag
aggcttcagcaagacgagccggtgtcgacgctccactcggacagcattgtccaccagctt
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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