KEGG   Acipenser ruthenus (sterlet): 117426297
Entry
117426297         CDS       T07327                                 
Name
(RefSeq) X-ray repair cross-complementing protein 5-like isoform X1
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    117426297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arut03400]
    117426297
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     117426297
SSDB
Motif
Pfam: Ku Ku_N Ku_PK_bind Ku_C VWA_2 Ribosomal_S2
Other DBs
NCBI-GeneID: 117426297
NCBI-ProteinID: XP_033899629
Position
12:23371507..23407287
AA seq 731 aa
MKAFYFMKRTVPSAMVLCLDVGFSMSNSAPGVVPPFEQAKKIIQMYVQRQVFADNKDELA
LVLFGSDETNNALAFDGQYQNIFVHRHLMLPDFNLLDEIQSDIQPGAQQTDFLDALVVCM
DLLQKETLVKKYEKLHIAIFTDLCSSCSSDHIDIIIDNLKKGGISLQFFLPFPLEEESRG
RGDAAAGPGQPPYSRKGLTQKQKEGLEMVRKVMTSLDEEEGLDEVHTFSESMEQLSIFKK
IERRPLAWPCQLTIGSSLTIRIVGYKAVTEEKMKKSWEVVDARTLRKEDVQRETVFCLND
DNETEVPMDDTIQGFCFGSDIVPFSKVDQEQMKYKSDGKCFSVLGFTKQSQVMRHHFMGS
QVFKVFAARNDKHAAVALSSLIHALDELEMVAIVRYVYNRCSNPQVGAAFPCIQDKYECL
MYVQLPYMEDLRQFTFSSLQNNKKYIPSGEQMAAVDSLIDSMMLVEGEGEEMEDLFEVSS
IPNPQFQRLFQCLNHRALNPSAPLPPPEPWLKGMLERPQEVTARCTAPLQQLRQRFPLQE
AICKKEQKTAQDIFGDVNEEEPSSKKARWYEDEKFNLAGLTEGTVTAVGSVDPGRDFRVL
MRQKSLPFSQVCQQLSSRVDQLLGTKGTQYYMKSISCMQAFREESSKAGDVEPYNSYLQT
LKKSVQERVLQDFWELLVQDNITLISKDEVEGSTVSKMEANQFLALEQKPDEQTTPSADD
GGDVDDLLDMM
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaaggcgttctactttatgaagcgcacggtaccgtctgccatggtgttgtgtctggac
gtggggttctccatgagtaactctgctccgggggtagtgcctcctttcgaacaagccaag
aagatcattcagatgtatgtgcagcgccaggtgtttgcagacaacaaggatgagcttgcc
ctggtactgtttgggtcggatgagaccaacaacgcactggcctttgacggccagtaccag
aacatctttgtgcatcgacatctcatgctgccggacttcaacctgcttgatgagatccag
agcgatatccagccaggagcccagcagactgactttcttgatgcgctggttgtttgtatg
gaccttctacagaaagaaacccttgtgaagaagtatgaaaagctgcacattgccatattc
acagacctgtgcagctcttgcagctctgaccacatcgacatcatcatagacaatttaaag
aaaggaggaatctccctgcagttcttcttgcccttccccctggaagaggagagcagaggt
cgcggggatgctgctgctggaccgggacagcccccctactctaggaagggcctcacgcag
aagcagaaagaaggcttagagatggtcaggaaggtgatgacctctctggatgaagaggaa
gggctggatgaggtccatacattcagcgagtcaatggagcagctgtccatttttaagaaa
atcgagaggaggccattggcgtggccctgccagctcaccatcggctcctcactgaccatt
cgcattgtcgggtacaaggcggtgacagaggagaagatgaagaagtcctgggaagtagtg
gacgctcggacactgaggaaagaagatgtgcagagagagaccgtcttctgcctcaacgat
gacaacgagactgaggttcccatggatgacaccattcaggggttctgctttggcagcgac
attgtccccttctccaaggttgaccaggaacagatgaaatacaaatcagacgggaagtgc
ttctccgtgctgggctttacaaagcagagtcaggttatgcggcatcacttcatgggcagc
caagtgttcaaggtgttcgctgcaaggaatgacaagcacgctgcagtggctctctcatcc
ctgatccatgccctagacgagctggagatggtggccatcgttcgctacgtatataacagg
tgcagtaaccctcaggtcggggcggcattcccctgcatccaggacaagtacgagtgcttg
atgtatgtacagctaccttacatggaggatctcaggcagtttacattctcttctcttcag
aacaacaagaaatacatcccttcaggggagcagatggctgcggtggactccctgattgac
tccatgatgctggtggagggggagggggaggagatggaggacctgtttgaagtcagcagt
atcccaaacccccagttccagaggctcttccagtgtctgaaccaccgggctctgaacccg
tctgctcccctgccccctcccgagccctggctgaaggggatgctggagagaccgcaggag
gtgacggcccgctgcacagctcccctccagcagctccgccagcgcttccccctgcaggag
gccatctgcaagaaggagcagaagactgcccaggacatcttcggagacgtcaatgaagag
gagccaagctctaagaaggctcgttggtatgaggatgaaaagttcaaccttgcaggactc
acagaaggcactgttacagctgtgggtagtgttgatccaggcagagatttccgcgttctc
atgagacagaagagccttccctttagccaagtgtgtcagcagctatccagcagggtagac
cagctccttggcaccaaaggcacacagtattacatgaagagcatctcctgcatgcaagcc
ttccgcgaggaatctagcaaggctggcgatgtggagccatacaacagctaccttcagaca
ctgaagaagagtgtccaggagagggtgctgcaagacttttgggagcttcttgtgcaagat
aacatcaccctaatcagcaaggacgaggtggaaggcagtacagtgtccaaaatggaagcc
aatcagttcctggctctagagcagaagccggatgagcagacaactccctctgctgacgac
ggaggggatgtggatgacttgctggatatgatgtga

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