KEGG   Alosa sapidissima (American shad): 121681178
Entry
121681178         CDS       T11137                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AP-2 complex subunit alpha-2-like
  KO
K11824  AP-2 complex subunit alpha
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04142  Lysosome biogenesis
asad04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121681178
   04142 Lysosome biogenesis
    121681178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121681178
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asad04147]
    121681178
Membrane trafficking [BR:asad04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    121681178
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   121681178
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 HEAT_2 RIX1 HEAT_MROH2B_1st HEAT_GCN1 HEAT_EF3_N TOR1L1_N SUV2_M PDS5
Other DBs
NCBI-GeneID: 121681178
NCBI-ProteinID: XP_041916699
Position
14:17265478..17289178
AA seq 1032 aa
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSDLIRLINNAIKNDL
ASRNPTFMNLALHCIANVGSREMAEAFAADVPRILVAGDTMDSVKQSAALCLLRLNRTSP
DLVPMGEWTARVVHLLNDQHLGVVTAATSLITTLAQKNPDDFKTSVSLAVARLSRIVTSA
STDLQDYTYYFVAAPWLSVKLLRLLQCYPPPEDAAIRGRLTECLETILNKAQEPPKSKKV
QHSNAKNAVLFEAISLIIHHDSEPTLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
FSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAKQIVAEMLSYLETADYSI
REEIVLKVAILAEKYAVDYTWYVDTILNLIRIAXDYVSEEVWYRVXQIVINRDDVQGYAA
KTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVPTRAL
LLSAYIKFINLFPEVKGTIQEVLRSDSQLRNADVELQQRAVEYLRLSCVASTDILATVLE
EMPPFPERESSILAKLKRKKGPGTVPDIEENRKERNANVNGGPNHTSATSNAKASPPSFV
GDLLAPAPPPTNRPRPVSSASFLQNPLTPLPPQAYAIPLAASAGTFYQQVAAPAAASSTD
LLGLGSSTSLNSTPPAAAPPTAASLLVDVFSENSPSVSAPAHIAVPATAAPAADDNFSSI
TTKSFHVAESILADVQEPTDKFVCKNNGVLYENQLLQIGLKSEYRQNLGRMYVFFGNKTS
TQFLNFASNVVCQDTLASQLNVHLKPVDPTVDGGAQLQQIINIECVSDFVEAPVLNIQFR
YGGTLQNIAVKLPITLNKFFQPTEMMSQDFFQRWKQLSAPQQEVQKIFKAKHSMDTEVTK
AKIIGFGVALLDGVDPNPSNFVGAGVIHTKTTQVGCLLRLEPNMQAQMYRLTLRTSRDTV
SQRLCDLLSDQF
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgcctgctgtttccaagggtgatggaatgcgtggccttgctgttttcatttctgatata
agaaattgtaaaagcaaggaagctgagatcaaaaggataaacaaagagttggccaatata
cgctccaagtttaaaggtgacaaggctctggatggctacagcaagaagaagtatgtgtgc
aaactccttttcattttccttctgggccatgatatcgattttggtcatatggaggcagtc
aacctcctgagttccaacaaatacacagaaaaacaaatcggctaccttttcatctcagtg
ttagtcaactccaacagcgatctcatcaggctcatcaacaacgccattaagaatgacttg
gccagcagaaatcccaccttcatgaacctggccctccactgtatagccaatgtgggaagc
agagaaatggcagaggcgtttgcagcagatgtgccgcgcatcctggtagcaggggacacg
atggacagtgtgaaacagagtgcagctctttgcttgctgcgcctcaacagaacctcacca
gacttggtccccatgggtgagtggactgcccgcgtggtccaccttctcaatgaccagcat
ttgggcgtagtgactgctgccaccagcctcatcaccacgctggctcagaagaacccagac
gactttaagacctccgtttctctggccgtggcccgactcagcaggattgtcacgtcagcc
tccacagatctacaggattacacatactactttgtcgcagcaccctggctgtcggtgaaa
ctactgcgactcttgcaatgttaccctccaccagaggatgctgctatccgagggcgtctg
accgagtgtttggaaaccatccttaacaaggcccaggaacctcccaagtccaagaaggtc
cagcactcaaacgctaagaatgctgtgctgttcgaggcaatcagcctcatcattcaccat
gacagtgagccaaccctgctggtgagggcatgcaaccagctgggccagttcctacagcac
agagaaaccaatctgcgctatcttgccctggaaagcatgtgcacgctggccagctccgag
ttctcccacgaggccgtcaaaacacacattgaaacagtcatcaatgctctcaagacggag
agagatgtgagtgtgaggcagcgggctgtggacctcctctatgccatgtgtgaccggagc
aatgccaaacagattgtagcagagatgctcagttacctggagacagccgactactccatt
cgagaggaaattgtgctgaaggtggctattttggccgagaaatatgcagtggactacacg
tggtacgtggacaccatcctgaacctcatcagaatcgcangagattacgtcagcgaggaa
gtttggtatcgggtcnatcagattgttattaacagagacgatgtgcaaggctatgctgct
aagacggtctttgaggctttgcaagccccagcttgccatgagaatctagtgaaggttgga
gggtacatcctgggagaatttggaaatcttattgcgggggatccacggtctagtccacta
gttcagttcaacttgctgcactccaagttccacctgtgctcggtgcccaccagagctctc
ctgctctcggcctacatcaagttcatcaacctgttccccgaggtgaagggcaccatccag
gaagtgctgcgctctgacagtcagctccgcaacgcagacgtggagctgcagcagcgggcg
gtggagtaccttcgcctcagctgcgtcgccagcacagacatactggccacagtattggag
gagatgcctcctttcccagagcgcgagtcgtccattttggccaagctgaagaggaagaag
gggcctggaacagtgccagacattgaggagaaccgcaaggagcgcaatgccaacgtcaac
ggaggcccaaatcataccagtgccacctcaaatgccaaggcctcccctccatcctttgtt
ggggatctgctggctccggcccctccccccaccaaccggccccgcccagtgtcctccgcc
tccttcctgcagaaccccctcacccctctcccccctcaggcctatgctatccccttagca
gcctctgctgggacattctatcagcaggtagctgcccccgccgccgcctcctccacagat
ctgctgggtctgggaagctccacctcccttaactccacccctcctgcagctgcccctccc
actgcagcgagcctgcttgttgacgtgttctcagagaacagcccgtcggtgtcggcgccg
gcgcacatcgctgtccctgccactgccgcccctgcagccgatgacaacttctccagcatc
acaacaaagtccttccatgtggctgaatcaattctggcagatgtacaggaaccaactgac
aagtttgtctgcaagaacaatggggtgctgtatgagaaccagctgcttcagattggcttg
aagtcagagtatcgacagaacctaggtcggatgtatgtgttttttgggaacaaaacctca
acacaattcctcaattttgcctccaatgtggtctgccaggacactcttgcttctcagctc
aacgtgcatctgaaaccagttgatcccacagtggatggaggagctcagctccaacagatc
atcaacattgaatgcgtgtctgactttgtagaagcacctgttctcaacatccagttcagg
tatggaggcactctccagaacatcgctgttaagctgcctatcactttgaacaagtttttc
cagcccacagagatgatgtcgcaagacttcttccagcgatggaaacaactaagcgctcca
cagcaggaggttcagaaaatcttcaaagccaagcattccatggacactgaagtcaccaaa
gcaaagatcattggttttggagttgctcttttggatggggtcgaccctaacccctccaac
tttgtaggcgcaggagtcatccatacgaaaaccactcaggtgggctgcctgcttcggctg
gagcccaacatgcaagcacagatgtatcgtctaactctgagaacgagccgggatactgtg
tctcagaggctctgtgatcttctgtcagatcagttctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (16)   

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