KEGG   Actinocatenispora thailandica: Athai_35540
Entry
Athai_35540       CDS       T07045                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
atl  Actinocatenispora thailandica
Pathway
atl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:atl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Athai_35540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atl03400]
    Athai_35540
Enzymes [BR:atl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Athai_35540
DNA repair and recombination proteins [BR:atl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Athai_35540
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: BCJ36051
UniProt: A0A7R7HXW2
Position
complement(3933132..3933632)
AA seq 166 aa
MTVQVGSRRVPLTHPDKVLFDGARDGGIDKAGLADYYRLVADRMLPHLREHPLALQRFPD
GVGGSGFFAKKVPDSAPDWVHTVRVDRVTGGSVTMLCADDVATLVYLAGLAAVALHPWPS
RASAPRRPVKLIFDLDPPGRTTSRPYGGPPWPCTSCWTSWTCRAIR
NT seq 501 nt   +upstreamnt  +downstreamnt
gtgacggtgcaggtcggcagtcgccgggtacccctgacgcacccggacaaggtcctgttc
gacggtgcgcgtgacggcgggatcgacaaggccgggctggccgactactaccggctggtg
gccgatcggatgctgccgcacctgcgcgagcatccgctggcgctgcaacgcttcccggac
ggggtcggcggctccggattcttcgccaagaaggtgcccgactcggcgccggactgggta
cacaccgtcagggtggaccgggtcaccggcggcagcgtgacgatgctgtgcgccgacgat
gtcgcgaccctggtctacctggccggtctggccgcggtggcgctgcacccgtggcccagt
cgggcgtcggccccgcgccgtccggtcaagctgatcttcgacctggacccgccggggcgg
acgacttcccggccgtacggcgggccgccctggccctgcacgagctgctggacgagctgg
acctgccgggctatccgatga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3)   

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