KEGG   Agrobacterium vaccinii: HRR99_22330
Entry
HRR99_22330       CDS       T08171                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K10857  exodeoxyribonuclease X [EC:3.1.11.-]
Organism
avq  Agrobacterium vaccinii
Pathway
avq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:avq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HRR99_22330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avq03400]
    HRR99_22330
DNA repair and recombination proteins [BR:avq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HRR99_22330
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: UHS64492
Position
pB7.6:33157..33912
AA seq 251 aa
MVEARVRVIDLETGGNGPNDVCEIGWQDVVIDHVGKWQVTEERGARFVNPGRPISPDTMA
IHHILDAQVADAPFWKEIASTVLRPPGRIDALAAHRAAFEQRYCTPRFTGGTPWICTWKC
ALRVWPQLPRFSNQMLRYQRMPDGLVHEIGLPAHRAMPDAYVTAHHLRDMLNQASLEDCM
AWSTEPGLLPRVPAGPDRGKPWDRISLETLNAFIADRDVDVRFSAQTELARRIEDKPSQD
EKPAQGMLGFE
NT seq 756 nt   +upstreamnt  +downstreamnt
gtggtcgaagccagggtacgcgtcatcgatctcgaaacaggcggtaatggcccgaacgac
gtttgcgagatcggctggcaggatgtcgtcatcgatcacgttggaaagtggcaggtcact
gaagagcgcggggcgcggttcgtcaaccctggccgtcccatctcacccgacacgatggcg
attcatcatatcctggatgcccaagtcgcggatgctcctttctggaaggaaatagcatca
accgttctccgtccacccggccgtatcgacgccttggcagctcatcgagccgctttcgag
caacgatattgcacaccgcggtttacaggcggaacgccttggatctgcacatggaaatgc
gcgctgcgtgtctggccacaacttccgcggttttccaaccagatgctgcgttatcaacga
atgcccgacggactggtgcatgaaatcggcctccccgcgcatagggcaatgcccgacgcc
tacgttacggctcatcacctccgcgacatgttgaaccaagcatcgcttgaggattgcatg
gcatggagcaccgaaccgggacttctaccgcgtgtgcctgccggaccggatcgaggaaaa
ccctgggatcgcatcagcctcgaaacactcaacgcgtttatcgcagatcgggatgtggac
gtgcgcttcagcgcacagacagaactggctcggcggattgaggacaagccgtctcaggat
gagaaaccggcacaagggatgcttggattcgaatga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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