KEGG   Nitrogeniibacter mangrovi: G3580_13780
Entry
G3580_13780       CDS       T06549                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
azq  Nitrogeniibacter mangrovi
Pathway
azq00010  Glycolysis / Gluconeogenesis
azq00020  Citrate cycle (TCA cycle)
azq00260  Glycine, serine and threonine metabolism
azq00280  Valine, leucine and isoleucine degradation
azq00310  Lysine degradation
azq00380  Tryptophan metabolism
azq00620  Pyruvate metabolism
azq00630  Glyoxylate and dicarboxylate metabolism
azq00640  Propanoate metabolism
azq00670  One carbon pool by folate
azq00785  Lipoic acid metabolism
azq01100  Metabolic pathways
azq01110  Biosynthesis of secondary metabolites
azq01120  Microbial metabolism in diverse environments
azq01200  Carbon metabolism
azq01210  2-Oxocarboxylic acid metabolism
azq01240  Biosynthesis of cofactors
Module
azq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
azq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
azq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
azq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:azq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    G3580_13780 (lpdA)
   00020 Citrate cycle (TCA cycle)
    G3580_13780 (lpdA)
   00620 Pyruvate metabolism
    G3580_13780 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    G3580_13780 (lpdA)
   00640 Propanoate metabolism
    G3580_13780 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    G3580_13780 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    G3580_13780 (lpdA)
   00310 Lysine degradation
    G3580_13780 (lpdA)
   00380 Tryptophan metabolism
    G3580_13780 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    G3580_13780 (lpdA)
   00670 One carbon pool by folate
    G3580_13780 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:azq04147]
    G3580_13780 (lpdA)
Enzymes [BR:azq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     G3580_13780 (lpdA)
Exosome [BR:azq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   G3580_13780 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox GIDA FAD_oxidored NAD_binding_8 Pyr_redox_3 AlaDh_PNT_C Thi4 FAD_binding_3 FAD_binding_2 Biotin_lipoyl_2 Lycopene_cycl GCV_H DAO 3HCDH_N HI0933_like
Other DBs
NCBI-ProteinID: QID18599
UniProt: A0A6C1B6D1
Position
2966131..2967963
AA seq 610 aa
MSLKEIKVPDIGDFDEVPIIELFVKVGDTIALEDAICTLESDKATMDVPADAAGVVKEVL
VAVGDKVAEGTVLVKVEAAAGAATDSPPLQGEGQGGDGVKAAGNNPPSPSVPLPEGEGSV
APAPAGAWTGEVTLECDMLVLGAGPGGYSAAFRAADLGLKTVIVERYATLGGVCLNVGCI
PSKALLHVAQVMDEAEHMDSLGIAFAKPAVDIDKLRAHKSAVVGKLTGGLAGMAKGRKVD
VVRGYGHFLDPNHVEVEETTGTAQEKTGAKKVVKFKQCIIAAGSAAVHLPFIPRDERIVD
STGALELRQVPGKMLVIGGGIIGLEMATVYSSLGAKVDVVEMLDGLMQGPDRDAVKVWEK
QNTHRFDKIMLNTKTTAVEAKDDGLYVTFEGDKAPDGPQKYDMILQSAGRSPNGKKIGAE
NAGVIVTDRGFIPVDAQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVAAGEKAAFD
ATVIPGVAYTHPEVAWVGYTEAQAKAEGKQVDTAKFPWAASGRAIANGAEYGFTKLIFDA
ETHRVIGGSIVGPNAGDMIGEVCLAIEMGADAVDIGKTIHPHPTLGETVGMAAEVAHGSC
TDVPPARKKK
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgagcctcaaggaaatcaaggtccccgacatcggcgatttcgatgaagtcccgatcatt
gagctgttcgtcaaggtgggcgacaccatcgccctggaagacgccatctgcaccctggag
tccgacaaggccaccatggacgtgccggccgacgccgccggcgtggtcaaggaagtgctg
gttgccgtgggcgacaaggtggccgaaggtaccgtgctggtgaaggtggaagccgccgcc
ggcgcggcgaccgattcccctccccttcaaggggagggccagggtggggatggggtcaaa
gccgctggcaataacccaccctctccctcagtccctctccctgagggcgagggaagcgtc
gcgccggcccccgcgggcgcgtggaccggagaggtcacgctggagtgcgacatgctcgtg
ctcggcgccggccccggtggctactcggcggccttccgcgccgccgacctcggcctcaag
accgtcatcgtcgagcgctacgccaccctcggcggcgtgtgtctcaacgtcggctgcatc
ccctccaaggccctgctgcacgtggcccaggtgatggacgaggccgagcacatggacagc
ctcggcatcgccttcgccaagccggcagtggacatcgacaaactgcgcgcccacaagagc
gcggtggtcggcaaactcaccggcggcctggccggcatggccaagggccgcaaggtggac
gtcgtgcgcggctacggccacttcctcgaccccaaccatgtggaagtcgaggaaaccacc
ggcaccgcgcaggagaaaaccggcgccaagaaggtggtgaagttcaagcagtgcatcatc
gccgccggctcggcggccgtgcatctgcccttcatcccccgcgacgagcgcatcgtcgac
tccaccggcgcgctggaactgcgtcaggtgcccgggaagatgctggtcatcggcggcggc
atcatcggcctggagatggccacggtctactccagcctcggtgccaaggtcgatgtggtc
gagatgctcgacggcctcatgcaaggcccggaccgcgacgcggtcaaggtgtgggaaaag
cagaacacccaccgcttcgacaagatcatgctcaacaccaagaccaccgcggtcgaagcc
aaggacgacggcctgtacgtcaccttcgagggcgacaaggcaccggacggcccgcagaag
tacgacatgatcctgcagtccgccgggcgcagcccaaacggcaagaagatcggcgccgag
aacgccggcgtcatcgtcaccgatcgcggcttcatcccggtggacgcgcagatgcgcacc
aacgtgccgcacatcttcgccatcggcgacatcgtcggccagcccatgctcgcccacaag
gccgtgcatgaagcccacgtcgccgccgaagtcgcggctggcgagaaagccgccttcgac
gccaccgtgatccccggcgtggcctacacccatccggaagtggcctgggtcggctacacc
gaagcccaggccaaggccgagggcaaacaggtggacaccgccaagttcccctgggccgcc
agcggccgggcgattgccaacggcgccgaatacggcttcaccaagctcatcttcgacgcc
gagacgcaccgcgtcatcggcggcagtatcgtcggccccaacgccggcgacatgatcggc
gaagtgtgcctggccatcgaaatgggcgccgacgcggtcgacatcggcaagaccatccac
ccgcacccgaccctgggtgagacggtgggcatggccgccgaagtggcgcatggcagttgc
accgatgtgccaccggcgcggaagaaaaaataa

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