KEGG   Bombus affinis (rusty patched bumble bee): 126917797
Entry
126917797         CDS       T09368                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
baff  Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:baff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:baff03041]
    126917797
Spliceosome [BR:baff03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    126917797
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    126917797
SSDB
Motif
Pfam: MA3 SR-25 DUF2379
Other DBs
NCBI-GeneID: 126917797
NCBI-ProteinID: XP_050581042
Position
6:11855535..11859847
AA seq 738 aa
MKRSHSKTKETREDYRHSRDSDRGRDRDKTRERNRDRDQERDRDHYYYENRNNRKNVSHR
RNRDFEETNREERSYERHKLRKANDHWEAKENKKKPERNKITDKEMEKEETNASDEARQN
RTVELLTSRTGGAYIPPAKLRIMQAEITDKSGAAYQRIAWEALKKSIHGYINKVNVSNIG
LITRELLKENIVRGRGLLARSIIQAQAASPTFTSVYAALTAIINSKFPNIGELILKRLVI
QFKRGFRRNDKPLCISSGTFIAHLVNQRVAHEIVALEILTLLVETPTDDSVEVAIAFLKE
CGMKLTEVSRKGIEAIFEMLRNILHEGQLDKRVQYMIEVIFQVRKDGFKDHEAVPEELDL
VEEENQFTHLITLDEATDSQDILNVFKFDAEYINNEDKYKELSKEILNSDVSGSESEEED
DEEESSDEDSTAVAEGKEDIIVDNTETNLTALRRTIYLTIHSSLDFEECAHKLMKMQLKP
GQETELCHMFLDCCAEMRTYEKFFGLLAGRFCAINKMYVTPFEQIFQDSYHTIHRLDTNK
LRNVSKFFAHLLFTDSISWEVLSCIKLTEEDTTSSNRIFIKILFQELSEYMGLSKLNQRV
KDVTLKNAFEGLFPRDDPKNTRFAINFFTSIGLGGLTDDLREHLKSHPKPVIIPVLEQKS
ESASDSSADSSLSSSSESSSSSSSSTSSSSNDSDVSSDEDVKKGKKKLKKEQRKKQTTKE
NKKKHKKKEKAKKMKKVK
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgaagagatcacactcaaagacgaaagagacgagagaagattatagacattcgagagat
tccgatcgcggccgagatcgagataaaactcgtgagcgtaaccgtgatcgtgatcaggaa
cgtgatcgagatcattattattatgagaataggaataatagaaagaatgtttctcatagg
agaaatcgtgatttcgaagaaaccaatagagaggagcggtcatacgaacgacacaaatta
aggaaagcaaacgatcattgggaggcaaaggaaaataaaaaaaagccagaaaggaataaa
attacagataaagaaatggaaaaagaagaaacaaatgcttcggatgaagcaagacaaaat
cgaactgttgaacttttaacatcaagaacaggtggtgcttatataccacctgcaaagtta
cgaataatgcaagctgagattactgataaatcaggagctgcatatcaacgcattgcatgg
gaagccctaaagaaatctatacatggttatattaataaagttaacgtcagtaatattgga
cttataactcgagaacttttaaaagaaaatattgttagaggtagaggtttgctcgctaga
tctatcatacaagctcaagcagcatcaccaacctttacatctgtttatgcagccctcact
gcaattattaattctaagtttccaaatataggagaattaatattaaaacgtctagtaata
cagtttaaacgtggtttcagaaggaatgacaaacctctgtgtatatcttccgggacattt
atagcacatttggtaaatcaaagagtagcacatgagattgtggctttagaaattttgact
ttattagtagaaacaccaacagatgactcggtagaagtggcaatagcatttttaaaagaa
tgtggcatgaaattaacagaagtttctaggaagggtattgaggctatattcgaaatgcta
agaaatatattacatgaaggacaattagataaacgagttcaatatatgattgaagttata
tttcaagttaggaaagatggattcaaggatcatgaagcagttccagaagaacttgatctt
gtagaagaagagaatcaatttactcatttaataacattagatgaagcaacagattctcaa
gatatattaaatgtatttaagtttgatgcagaatatattaataatgaagataaatataaa
gaattaagtaaagaaatactaaattcagatgtcagtggttcagaaagtgaagaagaagat
gacgaagaagaaagttctgatgaagatagtactgctgtggcagaagggaaagaagacata
atagtagataatacagagacaaatctaactgcactcagaagaacaatatatttaacaata
cattcatcgcttgattttgaagagtgtgcacacaaattaatgaaaatgcaactaaaacct
ggtcaagaaactgaactctgtcatatgttcttagattgctgtgcagaaatgagaacatat
gaaaaattctttggattgttggctggtcggttttgtgccattaacaagatgtatgtcaca
ccatttgagcaaatttttcaagactcatatcatacaatacaccgtctagatacaaataaa
ttacgtaatgtatcaaagttttttgctcatttactatttactgattctatatcgtgggaa
gtattatcttgtataaaattaaccgaagaggatacaacaagttccaataggatatttata
aaaattttgtttcaagaactttctgaatacatgggactatctaaacttaatcaacgtgtg
aaagatgttacgttaaaaaatgcattcgaagggttgtttcccagagatgaccctaaaaac
acacgtttcgcaatcaatttctttacatccattggtttgggtggtctcacagacgattta
agggaacatttaaaatctcatccgaaacctgtcataattccagtattagaacaaaagagt
gagagtgcttctgattcttctgcagattcctctctttctagttcaagcgaatcatcgtca
tcttcaagctcttcaactagttcaagttctaatgattctgatgtatcttcggatgaagat
gtgaaaaaaggaaagaaaaaattgaaaaaagaacaaagaaagaaacaaacgacgaaagaa
aataaaaagaaacataagaaaaaagagaaagctaagaaaatgaaaaaggtcaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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