KEGG   Belliella baltica: Belba_0379
Entry
Belba_0379        CDS       T02134                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
bbd  Belliella baltica
Pathway
bbd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Belba_0379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbd03019]
    Belba_0379
   03400 DNA repair and recombination proteins [BR:bbd03400]
    Belba_0379
Enzymes [BR:bbd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Belba_0379
Messenger RNA biogenesis [BR:bbd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Belba_0379
DNA repair and recombination proteins [BR:bbd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Belba_0379
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII adh_short
Other DBs
NCBI-ProteinID: AFL83042
UniProt: I3Z1C4
Position
complement(392166..394076)
AA seq 636 aa
MKTQAIQILQKFFGYADFRPSQLEIVLSAMEGKDCVALLPTGGGKSICFQVPALAQEGIC
LVVSPLVALMKDQVDNLRKRGVLAAAVYSGMQKREIDTILDNCVYGNYKFLYVSPERLKT
DLFIERFKRMNVNLIAVDEAHCISQWGYDFRPPYLEIAKIREFHPNVPCMALTASATLKV
KEDIISKLELKDPNVFVRSFSRKNLSYSVRLVENKIEKAIQILQRIPGSAIIYSRNRKGT
KDIAKELYQLGVSATFYHAGLDSATRELRQQEWKANKIRVMVATNAFGMGIDKPDVRVVI
HLDLPENLENYYQEAGRAGRDELKAYGVLLTNEQDIQKLTERAELAYPPIDYLKKVYQSL
ANQYRIAVGSSLFVSYDFDLTDFCSTYQLDVLMTYNAMKVLQEEGFVELNESFFAPSTIH
FLVNQSKLYEFQIANARLDPLIKALLRTYGGELFMEYIKIQEPKLAKSLNLPEGELVKQL
ELLDQFGVLAYHKRKEKPQVTFLTPRHDAGKLPLNAKRITERRDNSISKAASMVTYIQNA
VLCRANQISQYFGEESDDYCGICDVCVERKKKADNKVKQLKSKILQTLSEGKTFSLQSLP
IDAGISDDQQTLDVLRGMEDEGQIVSEPDGTYKLNN
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaaaacacaagcaatacaaattcttcaaaagttttttggatacgccgacttccggcca
tcccaattggaaatcgtactctcggcgatggaagggaaggattgtgttgctttattacca
actggaggcggtaagtctatttgcttccaagttcccgcattagcacaggaaggaatttgc
cttgtagtcagtccgcttgtggctttgatgaaagatcaagtggacaatcttcgaaaaagg
ggagtgcttgctgcagcagtttattctggaatgcaaaagcgtgaaatcgacacgattttg
gataattgtgtttacggaaattataaatttctttatgtttctcccgaaaggttaaaaaca
gatctgttcatagagcgcttcaaacggatgaatgtaaatttgattgctgttgatgaagcg
cactgtatttcacaatggggatatgattttcgaccgccttatttggagattgcgaaaatc
agagaattccatccaaatgtcccttgtatggctttgactgcctcagctacattgaaagtc
aaagaggatattatttcaaaattggaactcaaagacccaaatgtttttgtaagatctttt
tctaggaaaaatcttagttattcggttcgattggttgaaaataagatcgaaaaagcaata
caaatacttcaaagaattcctggttcagcaattatttactcaagaaatagaaaaggcact
aaggatattgctaaggagctttatcaactgggagtttcagctactttttatcatgctggc
ttggatagtgcaacccgtgaactcagacagcaagagtggaaagcaaacaaaattcgtgtg
atggttgcaaccaatgcctttgggatgggaattgataagcccgacgtaagggtggtgatt
catttggatttgccggaaaatctagagaattattatcaagaagcgggtcgtgcaggacga
gatgaattgaaggcttatggggttttgttgactaacgaacaggatattcaaaagcttaca
gagcgagcggaattggcttatccaccgatcgattatcttaaaaaagtttatcagtcacta
gccaaccaatataggattgctgtagggagcagcttgtttgtgagttatgattttgaccta
actgacttttgctctacctatcaattagatgttttgatgacttataatgccatgaaggta
cttcaagaggaaggatttgttgaattgaatgaaagtttttttgccccatctactattcat
tttcttgtcaatcaatccaaactatatgaattccaaattgctaatgctaggctagaccca
ttgatcaaggcactcttgagaacttatggaggcgaattatttatggaatatattaaaatt
caagagccaaaattagcgaaaagtctaaatcttcctgagggagaattggtgaagcaattg
gaattgcttgatcaatttggagtcttggcatatcataagcgaaaagaaaaaccccaagtg
actttcctaaccccgagacatgatgcaggaaaattacctttaaacgccaaaagaattact
gaaagaagagataactcgatctcaaaagctgcatctatggtgacttatattcagaatgcc
gtactttgtagggctaatcagatttcgcaatattttggggaggaaagtgatgactattgt
gggatttgtgatgtatgcgtggagcgtaaaaaaaaagcagataataaagtgaagcaactt
aaatcaaaaatccttcaaactttaagtgaaggcaagacgttttctttgcagtcacttccc
atagatgctggaattagtgatgatcagcagacccttgatgttttgaggggaatggaagac
gaaggtcagatagtatctgaaccggacggtacatacaaactcaataactaa

  All links  
Gene (16)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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