KEGG   Burkholderia sp. CCGE1003: BC1003_1550
Entry
BC1003_1550       CDS       T01314                                 
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
bgf  Burkholderia sp. CCGE1003
Brite
KEGG Orthology (KO) [BR:bgf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bgf03021]
    BC1003_1550
Transcription machinery [BR:bgf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BC1003_1550
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_20 HTH_Crp_2 KORA
Other DBs
NCBI-ProteinID: ADN57520
UniProt: E1T6U4
Position
1:1774756..1775844
AA seq 362 aa
MPKSKRRLPQAESETISDATSASMDDSGASEAEEELAEERELDDRQGAEESGEGGEAREG
ASEAVPDADDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQKYSRLAKAGEFEARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMNSGDAAERRDASIDDIAYLTGKTA
DEVTDILALNEHTASLDAPLDLDPASSLLDLLSDDQSQSPDAEVQHRELETLTRAWLARL
SDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDA
VL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgccgaaatcgaagcgccgcctgccgcaagccgaatctgaaacgatcagcgatgccacg
tccgcttcgatggacgacagcggcgcgtcggaagcggaagaagagctcgcagaggagcgc
gagctcgacgaccgtcagggcgcggaagaaagcggcgagggcggcgaagcccgtgagggt
gcaagcgaggcggtccccgacgcagacgacttccgcgcgctcctgcaagccgagctgacg
gccgacaccatccagcactatctgaatcgcatcagcgtaaagccgcttctcactgtcgaa
gaagagcagaaatactcgcgtctcgcgaaggcaggcgagttcgaagctcggcaggtcatg
atcgagcgcaacctgcggcttgtcgtcagcatcgctaagggttatttgaatcgcggcgtg
ccccttctcgatctgatagaagagggcaacctcggcttgatgcatgccatcgagaagttc
gatcccacgcgcggcttccggttttctacctacgccacctggtggatccgacagagtatc
gagcgcgcgatcatgaaccaggcgcgcaccgtgcggctgccggtgcacgtgattcgcgag
ctcaaccaggtgctgcgggccaagcgccatctggaaaaaaattcgatgaattcgggcgat
gccgccgagcggcgcgacgccagcatcgacgatattgcttatctgaccggcaagaccgcc
gacgaagtcacggacattcttgcgctgaacgagcacaccgcgtcgctggatgcgccgctc
gatctcgatccggccagcagtctgctcgacctgttgtcggacgaccagagccagtcgccg
gacgcggaggttcagcatcgcgagctcgaaacgctcacgcgtgcgtggcttgcgcgcctg
tccgacaagcatcgccacgtgatcgaacggcgcttcggcttgaaccacatcgaaccggcc
acgctcgaagagctggccgacgaaatgggcctcacgcgcgagcgtgtgcgccagatccaa
caggaagcgctcgtgaggttaaagcgcttcttcgcttccaacggcgttcggaaagacgcc
gttctctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (10)   

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