KEGG   Bidens hawaiensis: 143571874
Entry
143571874         CDS       T11418                                 
Name
(RefSeq) nuclear poly(A) polymerase 1-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    143571874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143571874
Enzymes [BR:bhw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     143571874
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     143571874
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central LpxI_C
Other DBs
NCBI-GeneID: 143571874
NCBI-ProteinID: XP_076913302
Position
Unknown
AA seq 681 aa
MGSQGFNNQKNGQRLGITEPISLGGPTEFDVIKTKELEQFLAEAGLYESHEEAIRREEVL
GRLDQIVKVWVKKVSRARGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAD
RDEDFFGELKRMLLEMPDVTELHPVPDAHVPVMRFKLNGVSIDLLYARLSLWVIPDDLDI
SQDSILQNADDKTVRSLNGCRVTDQILSLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGFL
GGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQIWDPRK
NPKDKYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFKRGHEVCEAMVLNNGSWLELFEP
HRFFEAYKNYLQIDIVAVCDEDMMNWKGWVESRIRYLVFKIERDTFKLLLCHPHPGDFPD
KLNPCHCSYFLGLQRKEGVPVNEAKKFDIRATVEEFKGNVGSYISWKPGMGISVTHIKRR
DIPAFVFPGGVRPARPARPSVEERQAPDTSAASSVDAATSVDVNVVDGPGDDDTRKRKRE
EEDELTKLTELTKLSTPEQLRNDVPTVGPEGINVNDQAGTSGVKNESLDQKSEDISGQLG
QQVEELEELDDSFQNKYLKENDMEHSTVKEVASSVNESLEELEAPELVVPLPRATHAAAA
QKKPIMRFNFTSLAKATGNSS
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgggtagccaagggtttaataatcagaaaaatggtcaaaggttgggcatcacagagccc
atatctttgggtgggccaaccgagtttgatgtaatcaagaccaaagaacttgaacagttt
ttggctgaagctggtctatatgagagtcatgaggaggccatacgtagggaagaggtttta
gggcggcttgatcagattgtaaaagtttgggtgaaaaaagtaagccgtgcaagggggtta
aacgaacagcttgtacaggaagcgaatgctaaaattttcacctttggatcctatcgtctt
ggggtacatggacctggtgcggatattgatacactctgtgttggaccaaggcatgcagat
cgagatgaggatttctttggcgaacttaaaagaatgcttttggagatgcctgatgtaaca
gaattgcatcctgtacccgatgctcatgtccccgtgatgagatttaagctgaatggggtt
tcaatagatcttctgtatgcaagactttcactttgggttatacctgatgatttggatatt
tctcaagactcaatactgcaaaacgccgatgataaaactgttcgcagtcttaatggatgc
agagttactgatcagatcctgtctttagtgcctaatattcagaatttccgcacaacacta
agatgcatgaggttttgggccaaacgaaggggcgtttattcaaatgttgcaggatttctt
ggtggcataaactgggctttgcttgttgctcgcatttgccaactgtaccctaatgcactg
ccaaatatgctagtttctcggttctttagggtctacactcagtggcgatggccaaatcca
gtaatgctctgtgctattgaggaaggatcacttgggttgcaaatttgggatcctagaaaa
aaccctaaagataaatatcatttaatgccaattattactccggcttatcctagcatgaac
tccagctataacgtgtcatcaagtactttacgaataatgactgaagagtttaagaggggt
catgaggtttgtgaggctatggtgttaaataatggtagttggcttgaattgtttgagcca
catcgtttttttgaagcatacaagaattatcttcagatagatatagttgcagtgtgtgat
gaagatatgatgaattggaaaggatgggttgaatcccgcatacgctaccttgtatttaag
attgaaagagacaccttcaaattactgctgtgccacccacatccaggtgactttccagac
aagttaaatccatgtcactgcagttactttttaggtcttcaaagaaaagagggtgtgcct
gtgaatgaagccaagaagtttgatatacgggcgacagttgaagaatttaaaggtaatgtt
ggttcatatatttcatggaagccgggaatgggcataagtgtaactcacataaagcgtaga
gacattcctgcttttgtttttcctggtggtgttcgacctgcacggcccgctcgaccaagt
gtggaagaaaggcaggccccagacacaagtgctgccagcagtgtggatgcagcaacttca
gttgatgttaatgttgttgatggaccgggtgatgatgatacaaggaaacgcaaacgagag
gaggaggacgagttgactaaattgactgagttgaccaagttgagcactcccgagcagttg
agaaatgatgtgcctactgttggtcccgagggtattaatgtcaacgatcaagcggggaca
tcgggagtcaaaaatgagagtttggaccaaaagagtgaagatatcagtggtcaattaggt
caacaagttgaggagctagaagaacttgatgatagttttcaaaataagtatttaaaagaa
aacgacatggaacattcaactgttaaagaagtagctagttctgtgaatgagagcttagaa
gagcttgaggcacccgaacttgtcgtgcctctgccgagggcaacgcatgccgctgcagca
cagaaaaagccaattatgaggtttaactttacctcattggcaaaggctactggcaacagt
agttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system