KEGG   Bacillus inaquosorum: AN935_00730
Entry
AN935_00730       CDS       T07179                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
biq  Bacillus inaquosorum
Pathway
biq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:biq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AN935_00730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:biq03021]
    AN935_00730
   03400 DNA repair and recombination proteins [BR:biq03400]
    AN935_00730
Enzymes [BR:biq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AN935_00730
Transcription machinery [BR:biq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AN935_00730
DNA repair and recombination proteins [BR:biq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AN935_00730
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF961 PASTA
Other DBs
NCBI-ProteinID: AMA50867
UniProt: A0A9Q4F0I9
Position
118651..119595
AA seq 314 aa
MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEIDVQGEGTVTAADITHDSDVEI
LNPDLHIATLGENASFRVRLTAQRGRGYTPADANKRDDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatcgagattgaaaaaccaaaaatcgaaacggttgaaatcagcgacgatgccaaattt
ggtaagtttgtcgtagagccacttgagcgtggatatggtacaactctgggtaactcctta
cgtcgtatcctcttatcctcactccctggtgccgctgtaacatcaatccagatagatggt
gtactgcacgaattctcgacaattgaaggcgttgtggaagatgttacaacgattatctta
cacattaaaaagcttgcattgaaaatctactctgatgaagagaagacgctagaaattgat
gtacagggtgaaggaactgtaacggcagctgatattacacacgatagtgatgtagagatc
ttaaatcctgatcttcatatcgcaactcttggtgagaatgcgagtttccgagttcgcctt
actgctcaaagaggacgtgggtatacgcctgctgacgcaaacaagagagacgatcagcca
atcggcgtaattccgatcgattctatctatacgccagtttctcgtgtatcttatcaggta
gagaacactcgtgtaggccaagttgcaaactatgataaacttacacttgatgtttggact
gatggaagcactggaccgaaagaagccattgcgcttggttcaaagattttaactgaacac
cttaatatattcgttggtttaactgacgaagctcagcatgctgaaatcatggttgaaaaa
gaagaagatcaaaaagagaaagttcttgaaatgacaattgaagaattggatctttctgtt
cgctcttacaactgcttaaagcgtgcgggtattaacacggttcaagagcttgcgaacaag
acggaagaagatatgatgaaagttcgtaatctaggacgcaaatcacttgaagaagtgaaa
gcgaaacttgaagaacttggactcggacttcgcaaagacgattga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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