KEGG T07179: AN935

Bacillus inaquosorum: AN935_20965

Entry

AN935_20965       CDS       T07179

Symbol

gyrB

Name

(GenBank) DNA topoisomerase IV subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

biq Bacillus inaquosorum

Brite

KEGG Orthology (KO) [BR:biq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:biq03032]
    AN935_20965 (gyrB)
   03400 DNA repair and recombination proteins [BR:biq03400]
    AN935_20965 (gyrB)
Enzymes [BR:biq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AN935_20965 (gyrB)
DNA replication proteins [BR:biq03032]
Prokaryotic type
  DNA Topoisomerases
   AN935_20965 (gyrB)
DNA repair and recombination proteins [BR:biq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AN935_20965 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AMA54623

Position

4124369..4126285

AA seq 638 aa
MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTD
INIQIEKDNSITVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGSGYKVSGGLHGV
GASVVNALSTELDVTVHRDGKIHRQTYKRGVPVADLEIIGETDHTGTTTHFIPDPEIFTE
TTVYDYDLLANRVRELAFLTKGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNRSKEVV
HEEPIYIEGEKDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDY
ARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAA
METFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPS
ISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGT
GIGEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKV
QQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVT
LEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI

NT seq 1917 nt +upstreamnt +downstreamnt
atggaacagcagcaaaacagttatgatgaaaatcagatacaggttctagagggattggaa
gctgttcgtaaaagaccggggatgtatatcggttcaacaaacagcaaaggccttcaccac
ctggtatgggaaattgtcgacaatagtattgacgaagccctcgccggttattgtacggat
atcaacattcaaattgaaaaagacaacagcatcacggtgacagataatggccgcggtatt
ccagtcggtattcaagaaaaaatgggccgtcctgcggtagaagtcattatgacagtgctt
cacgccggaggaaaatttgacggaagcggttataaagtgtccggaggattacacggtgta
ggtgcgtcagttgtaaacgcgctttcaacggagcttgatgtgacggtacaccgtgacggt
aaaatccaccgccaaacctataaacgcggagttccggttgcagaccttgaaatcattggc
gaaacggatcatacaggaacgacgacacattttatcccggatcctgagattttcacagaa
acaactgtgtatgattatgatctgcttgctaaccgcgtgcgcgaattagcctttttgaca
aaaggcgtcaacatcacgattgaagataaacgtgaaggacaagagcgcaaaaatgagtac
cattacgaaggcggaattaaaagttatgtagagtatttaaaccgttctaaagaagtagtc
catgaagaaccgatttacattgaaggcgaaaaggacggcattacggttgaagtggctttg
caatacaatgacagctacacaagcaacatttactcgtttacaaacaacattaacacgtat
gaaggcggtacccacgaagctggtttcaaaacgggtctgactcgtgttatcaacgattac
gccagaaaaaaagggcttattaaggaaaatgatccaaacttaagcggagatgacgtaaga
gaagggttgaccgcgattatttcaatcaaacaccctgatccgcagtttgagggccaaacg
aaaacaaaactaggcaactcagaagcacggacaatcaccgatacgttattttctgcggca
atggaaacatttatgctggaaaatccagatgcggccaaaaaaattgtcgataaaggttta
atggcagcgagagcacgaatggctgcaaaaaaagcgcgtgaattaacacgccgcaagagt
gctttggaaatttcaaaccttccaggtaagttagcggactgctcttcaaaagacccgagc
atctccgagttatatatcgtagagggtgactctgccggaggatctgctaaacaaggccgc
gacagacatttccaagccatattgccgcttagaggtaaaatcctgaacgttgaaaaagcc
agattggataaaatcctatctaacaacgaagtgcgctctatgatcacagcgctcggcacg
ggtatcggggaagatttcaacctggagaaagcccgttaccacaaagttgtcattatgaca
gatgccgacgttgacggcgcgcacatcagaacactgctgttaacgttcttttacagatat
atgcgccaaattattgaaaatggctatgtgtacattgcgcagccgccgctctacaaggtt
caacagggaaaacgtgttgaatatgcatacaatgacaaggagcttgaagaactgttaaaa
actcttcctcaaacgcctaagcctggattgcagcgctataaaggtcttggtgaaatgaat
gccacccagctatgggagacaaccatggatccaagctctagaacgctccttcaggtaact
cttgaagatgcaatggatgcggatgagacatttgaaatgctgatgggcgacaaagtagaa
ccgcgccgaaacttcatagaagcgaatgcgagatacgttaaaaatcttgacatctaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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