KEGG   Bos indicus (zebu cattle): 109567101
Entry
109567101         CDS       T04792                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04151  PI3K-Akt signaling pathway
biu04382  Cornified envelope formation
biu04510  Focal adhesion
biu04512  ECM-receptor interaction
biu04820  Cytoskeleton in muscle cells
biu04926  Relaxin signaling pathway
biu04933  AGE-RAGE signaling pathway in diabetic complications
biu04974  Protein digestion and absorption
biu05146  Amoebiasis
biu05165  Human papillomavirus infection
biu05200  Pathways in cancer
biu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:biu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    109567101 (COL4A2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109567101 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109567101 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109567101 (COL4A2)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    109567101 (COL4A2)
  09154 Digestive system
   04974 Protein digestion and absorption
    109567101 (COL4A2)
  09158 Development and regeneration
   04382 Cornified envelope formation
    109567101 (COL4A2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    109567101 (COL4A2)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    109567101 (COL4A2)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    109567101 (COL4A2)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    109567101 (COL4A2)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    109567101 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:biu04147]
    109567101 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:biu00536]
    109567101 (COL4A2)
Exosome [BR:biu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   109567101 (COL4A2)
Glycosaminoglycan binding proteins [BR:biu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109567101 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 109567101
NCBI-ProteinID: XP_019827406
UniProt: A0A6P5CMU2
Position
12:83167569..83323869
AA seq 1683 aa
AQSVLAGVKKLDVPCGGRDCSGGCQCYPEKGXRGQPGPVGPQGYTGPPGLQGFPGLQGRK
GDKGQRGAPGITGPKGDVGPRGVSGFPGADGIPGHPGQGGPRGPPGYDGCNGTVGDSGYA
GPPGPGGFLGPRGPQGPKGQKGEPYALSSEDRDKYRGEPGEPGLVGLQGPPGRPGPVGQM
GPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDMGLQGPGGIPPDNGYVEKPTPVY
ELLPEQYKGEKGSQGEPGRIGVSLKGEEGVVGFSGPRGAPGIDSEKGLPGQKGSRGLDGY
QGPDGLPGPKGERGDPGPPGPPAYSPYPSVAKGVRGEPGSPGAPGEPGDRGVPGDPGLPG
RPGTTIGDEDEKRGLPGEMGPKGFTGEQGFPALYPGPPGTDGQPGLRGPPGLPGPPGPDG
FLFGLKGEKGSGGFPGSSGFPGARGQKGWKGDAGDCKCADQFIRGPPGLPGPKGFAGANG
QPGSKGSQGDPGQHGVPGFAGFKGAPGNVGPPGPKGMKGDSRTITTKGERGQPGVPGXPG
LKGSDGIPGPPGLDGFHGLPGPPGDGIKGPRGDTGXPGAPGTKGLPGERGPPGLGLPGPK
GERGFPGDAGLPGPPGFPGPPGLPGSPGQIDCDSGVKRPIGADGQETIQPGCVGGPKGSP
GQPGLPGPPGAKGLRGIPGFSGADGAPGLKGLPGDPGREGFPGPPGFMGPRGSKGAVGPP
GLDGLPGASGLPGPVGPPGDRGLPGEVLGAQPGPRGDSGLPGRPGPKGPPGERGPPGFRG
SQGMPGMPGQKGQPGSPGLSGQPGLPGPPGQHGFPGAPGREGPLGPPGAPGFQGLPGDRG
EPGDTGVPGPVGMKGGSGDRGDPGQQGERGHPGHPGFKGVSGMPGAPGLKGARGSPGMDG
FEGMLGLKGRPGLPGIKGEAGFFGIPGLKGLAGEPGVKGSRGDPGPPGPPPLIEPGMKDI
KGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSGIPGLPGRPGQIKGVKGDTGIPGVPGSPG
FPGVPGSPGIMGFXGFTGSRGDKGVPGRAGLFGEVGPTGDFGDIGDTIDLPGSPGLKGER
GTTGIPGQKGFFGERGTEGDIGFPGITGLAGVQGPPGFKGQKGFPGLTGLQGPQGDPGRA
GAPGIKGDSGWPGNPGLPGLPGLRGISGLHGLPGSKGFPGSPGADVHGDPGFPGPAGDKG
DPGEPNTLPGPTGAPGQKGERGAPGERGPIGSPGLQGFPGITPLSNISGSPGDXGAPGIF
GLEGYRGPPGPPGPAALPGSKGDEGSPGTPGSPGTKGWIGDPGPQGRPGVFGLPGEKGPK
GEPGFMGNIGPTGSPGDRGPKGPKGDRGLPGAPGAVGTPGITGIPQRIAIERGPVGPQGR
RGPPGAQGEMGPQGPPGEPGFRGAQGKAGPQGRGGVSAIPGFRGDQGPVGLQGPVGFEGE
PGRPGSPGLPGMPGRSISIGYLLVKHSQTDKEPMCPVGMNKLWSGYSLLYFEGQEKAHNQ
DLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEEDIRPYISR
CSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSXLED
FRATPFIECNGARGTCHYYANKYSFWLTTIPEQSFQGTPSADTLKAGLIRTHISRCQVCM
KNL
NT seq 5052 nt   +upstreamnt  +downstreamnt
gcccagagcgtcctggcgggtgtgaagaaattggaygtgccctgtggaggcagagactgc
agcgggggctgccagtgctaccctgagaaaggagsgcggggccagccagggccggtgggc
ccccaggggtacaccgggccccccgggctacagggcttcccaggactgcaaggccgcaag
ggtgacaagggccaaagaggagcccccgggatcacaggcccgaagggagacgtgggacca
agaggtgtttcgggattccctggtgccgacggaattcccggccatcccgggcaaggcgga
cccagaggacctcctgggtatgacggctgcaacgggaccgtgggcgactcgggctacgca
ggacccccgggccctggcggcttcctcgggccccgcgggccccaaggaccgaaagggcag
aaaggcgagccctacgctctgtcctcagaggaccgcgacaaatacaggggggaacctgga
gagccgggactggtcggcttgcaggggcctcccggccgccctgggcccgtgggacagatg
ggtccggttggagccccaggaagaccgggaccacctggaccccctggacccaaaggacag
ccaggcaacagaggacttggtttttatggagaaaaaggtgaaaagggcgacatgggactg
caggggcccggcgggattccaccggacaacggttacgtcgagaagcccacgccggtgtac
gagcttctcccagagcagtataagggtgaaaaaggcagccagggagaaccagggagaata
ggcgtctccttgaagggagaagaaggcgtcgtgggcttctcgggaccrcggggtgccccc
ggcatcgacagtgagaaaggcttgccgggacagaaaggaagcagaggactggacgggtac
caaggccctgacggattgccaggacccaagggagaaaggggcgacccaggcccccccggy
cccccggcctactccccgtatccttccgtggccaaaggtgtcagaggtgagccgggatcc
ccaggagcycccggggagccaggagaccgcggggtaccaggagaccccggcctgccaggc
cggcccggcacaaccatcggagacgaagatgagaagagaggcttgccrggtgaaatggga
cccaaaggcttcacaggagaacagggtttccccgcgctgtacccyggccccccagggact
gatgggcagccagggctccgcggtccccccgggctcccaggaccgcccggcccagacggt
tttctgttcggcctgaaaggagaaaaaggaagtgggggcttccctggctcctccgggttc
ccaggggctcgtggacagaaaggatggaaaggtgacgccggcgactgtaaatgtgcagat
cagttcatcaggggtccgccagggctgccaggacccaagggctttgcaggtgccaacggg
cagcctggcagtaaaggcagccaaggagaccccggccagcacggcgtccccgggttcgcc
gggttcaagggagcccctggtaacgtcggtccccccgggcccaaaggaatgaagggagac
tccaggaccatcaccaccaaaggtgagcggggccagccaggcgtcccaggcrcgccaggg
ctgaaaggtagcgacggcatcccaggaccacccgggctcgatgggttccacggactccca
ggccctcccggcgatggcatcaaaggccccagaggggacacaggccamccaggagccccc
ggcacgaagggccttccaggggagaggggccccccaggactgggcctgccaggccccaaa
ggcgagcgcggcttccccggcgatgctggattgcccggaccaccaggcttcccagggcct
cccggcctccccggctctccaggacagatcgattgtgactcgggtgtgaaaagacccatc
ggagcagacggacaggagaccatccagccaggttgtgttggaggacccaaaggatcccca
ggccagccgggtctccccggccccccaggtgccaaaggcctcagaggaatcccaggattt
tcaggagccgacggagctccagggctcaagggtctcccgggagatccaggtcgagaggga
ttcccaggacccccaggcttcatgggaccccgcggctccaaaggtgcagtgggcccccct
ggcctggatggactccctggcgcctccggcctaccrgggccagtcgggcccccaggggac
aggggccttcctggagaagtgctgggggcccagcccgggccccggggagactctggactg
cctggacgccccggaccraagggccctcccggagaaagaggcccgcctggcttcagggga
agccagggcatgccagggatgccaggccagaagggccagccgggctccccsggactctca
ggccagccaggactgccagggccaccaggacagcacggcttcccaggagcgcctggtcgg
gaggggcccttggggcccccgggcgcccccggctttcaaggtctgcctggagacagagga
gagccgggggacaccggcgtccctggccccgtgggcatgaaaggcggctctggggacaga
ggtgaccctggacagcaaggagagagaggtcaccctggacaccccggatttaaaggagtg
tctggaatgcccggtgccccgggactgaaaggggccaggggctcccccgggatggacggc
tttgaaggcatgctcggcctcaagggcagacctgggctcccaggaatcaaaggagaggca
gggtttttcggaattccagggctgaagggcctggctggtgagccgggtgtgaaaggcagc
cgaggagaccccgggcccccaggaccgccccccctcatcgagccagggatgaaagacatc
aaaggagagaagggagacgaaggccccatgggactgaaagggtacctgggcctgaaaggc
cttcctggaatgccaggtatccctgggctgtcgggaatcccagggctgcccgggagaccc
ggccagatcaaaggagtcaaaggagacactggaatccccggtgtgcccggctccccgggg
ttccccggcgtgcccggctcccccggaatcatggggttcyaaggcttcacgggcagtagg
ggtgacaagggcgttcccgggagagcaggcctcttcggcgaggtcggccccactggtgac
ttcggtgacatcggagacacgatagatctccccgggagcccgggcctgaagggggagcgg
ggcaccaccggaataccaggtcaaaagggattcttyggcgagagaggcactgagggtgat
atcggctttccrgggatcaccggcctggctggagtccagggcccccctggattcaaaggg
caaaaaggctttccaggactcacagggctccaggggcctcagggagacccgggacgggcc
ggagcgcctggcatcaaaggagactctggctggccggggaacccaggcttaccaggtctg
cccggactccgaggcatcagcggattgcacggtctgccaggcagcaaaggcttcccggga
tccccaggtgcagaygtccacggggaccccggattcccaggccctgccggggataagggt
gaccccggagagcccaacacccttccaggccccacgggagccccgggacagaagggcgag
cgtggagccccaggggagcgaggcccaatcgggagtccyggacttcagggctttccaggc
atcacccctctctccaacatctctgggtcaccaggggacrttggcgcgcccgggatattc
ggcctggaaggttatcgagggcccccggggccgcccgggcctgcagctctccccggaagc
aaaggcgatgaggggagtccaggaacccccggaagccccgggaccaaaggatggatcggc
gaccccgggccccagggccggcctggcgtgttygggctcccaggagaaaaagggcccaaa
ggggagccaggattcatgggcaacataggccccaccgggagcccgggcgaccgaggcccc
aagggacccaaaggagaccgaggactcccgggtgctcccggtgctgtggggactccaggc
atcacaggaatcccccagaggattgcgatcgagcggggcccagtgggtccacagggcagg
agaggccccccaggggctcagggggagatggggccacagggcccccccggagaaccaggt
ttccgtggggcgcagggcaaggccgggccccagggacgaggcggcgtgtcggccattccg
ggattccgtggagaccaggggcccgtggggctgcagggaccggtgggcttcgaaggggag
ccgggccgccccggaagccccggcctgcccggcatgcccggccgaagcatcagcatcggg
tacctcctggtgaagcacagccagaccgacaaggagcccatgtgccccgtgggcatgaac
aagctctggagcgggtacagtctgctctacttcgagggccaggagaaggcccacaaccag
gacctggggctggcgggctcctgcctggcacggttcagcaccatgcccttcctgtactgc
aaccccggggacgtctgctactatgccagccgtaacgacaagtcytactggctgtccacc
accgccccgctgcccatgatgcccgtggcygaggaggacatccggccctacatcagccgc
tgctctgtgtgcgaggccccggccgtcgccatcgcagtccacagccaggatgtctccatc
ccccactgcccggccgggtggcgcagcttgtggatcggatactccttcctcatgcacacg
gccgctggtgacgaaggaggtggccagtcgctggtgtcgccgggcagcygcctggaggac
ttccgcgccacgccgttcattgagtgcaacggggcccgcggcacgtgccactactacgcg
aacaartacagcttctggctgaccaccatcccggagcagagcttccagggcacgccctct
gccgacacactcaaggccggcctcatccgcacgcacatcagccgctgccaggtgtgcatg
aagaacctgtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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