KEGG   Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_0631
Entry
BBKW_0631         CDS       T04223                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
bks  Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bks00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBKW_0631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bks03019]
    BBKW_0631
   03110 Chaperones and folding catalysts [BR:bks03110]
    BBKW_0631
   03029 Mitochondrial biogenesis [BR:bks03029]
    BBKW_0631
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bks04147]
    BBKW_0631
Enzymes [BR:bks01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BBKW_0631
Messenger RNA biogenesis [BR:bks03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BBKW_0631
Chaperones and folding catalysts [BR:bks03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BBKW_0631
Mitochondrial biogenesis [BR:bks03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BBKW_0631
Exosome [BR:bks04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BBKW_0631
  Exosomal proteins of other body fluids (saliva and urine)
   BBKW_0631
  Exosomal proteins of breast cancer cells
   BBKW_0631
  Exosomal proteins of colorectal cancer cells
   BBKW_0631
  Exosomal proteins of bladder cancer cells
   BBKW_0631
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BAQ28766
Position
745349..746965
AA seq 538 aa
MAKIIAYDDEARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEID
LDDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVTAGSNPIALRRGIE
KASEAIVKELIAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR
FGLDLDFTEGMRFDKGYIAPYFVTNAEDQTAVLEEPYILLTSGKLSSQQDVVHIAELVMK
TGKPLLIIAEDVDGEALPTLILNNIRGTFKSCAVKAPGFGDRRKAMLQDMAILTGAQVVS
DELGLKLDSVDMSVLGTAKKVIVSKDETTIVAGGGSKEDVAARVAQIRAEIANTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKAENNVKLEGDEATGAAIVFRAIEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAAT
NEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPPAAAPAAGADMGY
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcaaagatcattgcatacgacgacgaagctcgtcagggaatgctcgcgggtctcgac
aagctcgctgacaccgttaaggtcaccctcggtccgaagggccgcaacgtggttctcgac
aagacctacggcgctccgaccatcaccaacgatggcgtctccatcgccaaggaaatcgac
ttggatgacccgtacgagcgcatcggcgccgagctggtcaaggaagtcgccaagaagacc
gacgatgttgctggagacggcaccaccaccgcaaccgtgctggcgcagtccctggtgcac
gaaggcctgaagaacgtcaccgccggttccaacccgatcgctctgcgtcgtggtatcgag
aaggcttccgaggctatcgtcaaggagctcatcgcagctgccaaggacgttgagaccaag
gaccagatcgctgccaccgcaacgatttccgcagccgatccggaagtcggcgagaagatc
gccgaagcgctggacaaggttggccaggatggtgttgtgaccgttgaggacaacaaccgt
ttcggcttggatctggacttcaccgaaggcatgcgtttcgacaagggctacatcgccccg
tacttcgtgaccaacgccgaagatcagaccgcagtgctcgaagaaccgtacatcctgctg
acctccggcaagctgagctcccagcaggacgtcgtacacatcgccgaactggtcatgaag
accggcaagccgctgctgatcatcgccgaggacgtcgacggcgaggctctgccgaccctg
atcctgaacaacatccgcggcaccttcaagtcctgcgccgtcaaggctccgggcttcggt
gaccgtcgcaaggccatgctgcaggatatggccattctgaccggcgcacaggtcgtgtcc
gacgaactgggtctcaagcttgattccgtcgacatgtccgtgctcggcactgccaagaag
gtcatcgtctccaaggatgagaccaccatcgtggccggcggcggctccaaggaagacgtg
gctgcccgcgtggctcagattcgtgccgaaatcgccaacaccgattccgattacgatcgc
gagaagctgcaggaacgtctggccaagttggctggcggcgttgccgtcatcaaggttggc
gctgccaccgaagtcgaggccaaggaacgcaagcaccgcatcgaagatgccgtgcgcaac
gccaaggccgccatcgaagaaggcctgctgccgggcggcggtgtcgctctggttcaggct
gctgccaaggccgagaacaatgtcaagctcgaaggcgacgaggcaaccggtgccgcgatc
gtgttccgcgccatcgaagctccgatcaagcagatcgccgagaacgctggcctgtctggc
gacgtggtgatcgacaaggttcgttccctgcctgacggtcagggcctgaacgctgcaacc
aacgagtacgaggacctgctggctgccggtgtcaccgacccggtcaaggtcacccgttcc
gctctgcagaacgcagcttccatcgctggtctgttcctgaccaccgaggctgttgtggcc
aacaagccggaaccgccggcagctgctccggccgctggcgctgacatgggctactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3)   

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