KEGG   Brassica napus (rape): 106403096
Entry
106403096         CDS       T04128                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106403096
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106403096
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    106403096
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 106403096
NCBI-ProteinID: XP_013699401
UniProt: A0ABQ7Z2M4
Position
C6:complement(31074001..31077161)
AA seq 666 aa
MGRHDSSSEEDKRVRRSDRERGRRGSTRVTADKPTSDDRQKSSRESERKRRDNEGLLKRD
RRERDWSDSQRDKLRKEEKSGVTKPKLPELNPSDSNAKAWGKTGGVYIPPFKLARMMKEV
DDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQM
ASPGFTDVFAALVAVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQ
QVAEEIIALELVSVLLETPTDDSVEVAVGFVTECGAMLQDVTPKGLHGIFERFRGILHEG
DIDKRVQYLIEGLFAIRKAKFQGHPAVRPELDLVEDKYSHDVSLNDEIVPETSLDVFKPD
PDFIENERKYEALKKELLGEDESEDEDGSDASSEDNDEEEEDESGEEQMRIRDETETNLV
NLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQR
FCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEE
DTTSSSRIFIKILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTS
IGLGGITESLREYLKNMPRLIMQQQKQVAKSESGSDSSGSDSDSSSSSSSSDESERETRK
RRRRRS
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgggtaggcacgatagttcctccgaggaagacaagagagtgagaagaagtgatagagag
aggggtcgtaggggtagtactagggtcacagctgataagcctacttctgatgataggcaa
aagagtagtagagaaagcgagaggaaacgtagagataatgaaggtctcttaaagagagat
cgcagggagagagactggtctgatagtcaaagagacaagctgagaaaggaagagaagagt
ggagttacaaagcccaagttaccagaactcaacccatctgatagcaatgccaaagcttgg
ggaaaaactggtggagtttatatccctccgttcaaactagcacgcatgatgaaggaggtg
gacgacaagagcagcgtagagtatcagcgtcttacgtgggacgctctccgtaaaagtatc
aacgggctggtgaataaggttaacgcaagcaacatcaagaacattatacctgagctgttt
gctgagaatctcatcagaggaagggggcttttctgccgttcgtgtatgaagtctcagatg
gcgtctcctgggtttaccgatgtctttgcagctttggtcgctgttatcaacgccaagttc
cccgaagttgctgaacttttgttgaaaagggtcgttttgcagctgaagagagcgtataag
cgtaatgacaagcctcaactgctagctgcggtgaagtttatagcacatctagtaaaccag
caagtcgctgaagagatcattgctcttgagctagtctctgtacttttagaaacccctact
gatgacagtgtggaggtggctgttggattcgtgacagagtgtggtgccatgctccaggac
gttacaccaaagggattgcatggaatttttgagaggtttcgtggtatactgcacgaggga
gatattgataagagagtccagtatttgattgaagggctctttgctattaggaaagcaaaa
tttcagggacatccagctgttcgtcctgagctagatcttgttgaagataaatattcgcat
gatgtatctcttaacgatgaaatagttcctgaaacctctctggatgttttcaaacctgat
cctgacttcattgagaacgagaggaagtacgaggcgctgaagaaggagttacttggtgag
gatgagtctgaggatgaagatggctctgatgctagctcagaggataatgatgaggaggaa
gaagatgagtctggtgaagaacaaatgagaataagagacgagacagagactaatcttgtt
aatcttaggaggacaatataccttaccataatgtccagcgtcgattttgaggaagctggt
cacaagttgcttaaaattaaacttgaaccaggtcaagagatggaactgtgcataatgctc
ctggaatgttgctctcaggagagaacgtatctgcggtactacggtttgttgggtcagcgt
ttctgtatgatcaacaagattcaccaagagaatttcgagaagtgtttcgttcagcagtac
tctatgatccaccgtcttgagacgaacaagctgcgtaacgtggctaagtttttcgctcat
ttactgggcacagatgctctcccatggcatgtgcttgcctacattcgtttaaccgaggag
gacacgacttcatcctctcgtatcttcattaagatccttttccaggaattgtcagagcac
ttggggataaggctgcttaatgagaggcttcaggatccaacaatgcaggaatcacttgaa
tccatcttccctaaagacaatccaaagaacactcggtttgctatcaacttctttacctcc
attggtcttggagggatcacagagagtctcagagagtacctgaagaacatgccacgcctc
atcatgcaacaacagaagcaagttgctaaatcagaatcaggatcagacagttctggttct
gactcagattcatcgtcatcttcttctagttctgatgaaagcgagagagagacgaggaag
cgaagaagaagaagatcttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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