KEGG   Brassica napus (rape): 106438964
Entry
106438964         CDS       T04128                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic-like
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106438964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106438964
   03016 Transfer RNA biogenesis [BR:bna03016]
    106438964
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     106438964
Messenger RNA biogenesis [BR:bna03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     106438964
Transfer RNA biogenesis [BR:bna03016]
 Prokaryotic type
  tRNA degradation factors
   106438964
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1
Other DBs
NCBI-GeneID: 106438964
NCBI-ProteinID: XP_013735747
Position
A3:15264850..15269941
AA seq 905 aa
MLTSPSNALHSTPHFWPIRRSRLLLRPRNFPRFHSGGANFCSLSLLSARSGSSPRFSVRA
LAGPDASEDGLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTDGETIVYTSVCLAD
VPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMPKGFY
NETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNSKAVAGVRVGLIGGEFIVNPTVK
EMEESQLDLFLAGTDSAILTIEGYSNFLPEEMLVRAVKVGQDAVQATCTAIEALAKKYGK
PKMVDAIRLPPPELYNHVKELAGEELSKALQIKSKIARRKAITSLEEKVLTILTEKGYIV
DEAAFGTTEAQPELLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIPLLFSEVDVKLVFKE
VSSKLLRRRIVEGGKRSDGRTPDGIRPINSRCGLLPRAHGSSLFTRGETQALAVVTLGDK
QMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPGRREIGHGTLAERALETILPSD
DDFPYTIRVESTILESNGSSSMASVCGGCLALQDAGVPVKCSVAGIAMGMVWDTEEFGGD
GSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIMEKALIQAKAGRRY
ILAEMAKCSPPPTLSLSKYAPLILIMKVHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQD
DGTVKIMANDIASLERAKAIISGLTMVPAVGDIYRNCEIKSMAPYGAFVEIAPGREGLCH
VSELSAEWLAKPEDAYNIGDRIDVKLIEVNEKGQLRLSVRALLPESESDKDSQKQPPTTG
DSTKSSPRKYVNPSLKDRAATGASGDELVWKKKDVSRVSSGDKPMKSSSNEEDRGSLVND
EATIS
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgctgacgagtcccagcaacgcgcttcacagcactccgcacttctggcctattcgccgg
agcaggcttcttctccgtccccggaacttccctcgtttccactccggcggagcaaacttc
tgctcgctctctctcctctccgcaagaagtgggtcgagtcctagattcagcgtcagagct
ctagctgggccagatgcttccgaggacggtttagcttttcctaaccacgtgtccgtcaaa
atccctttcggaaacagagagattttggtagagactggtctgatgggaagacaagcaagt
tctgcagttactgtgacagatggagaaactattgtctacacatcagtttgtctagctgat
gtccctagtgagccttcagattttctccccctttatgttcattatcaggagcggttctca
gctgttggccgaactagtggtggattttttaagcgagaagggagaaccaaagatcacgag
gttctgatttgtaggttgattgatagacctctacgccccactatgcccaaaggtttctac
aacgaaactcagatattatcctgggttttgagttacgacgggttacacgcacctgatgct
ttagctgttacatctgctggaatagctgtagctctttcagaagtaccaaactcaaaggcg
gttgcaggagttagagtcggtcttattgggggcgagtttatcgtcaacccaactgttaag
gagatggaagagtcacagctagatttgtttctagctggaacagattctgctattttaacg
atagagggatatagtaattttcttcctgaggaaatgctggtcagagctgttaaagttgga
caggatgcagtacaagctacatgcactgctattgaagctttagcaaagaaatatggaaag
cccaagatggttgatgctatcagattaccacctcctgagctttacaaccatgtgaaagaa
cttgctggtgaggaattgagcaaagcgctacagattaagagcaaaatagcaagaaggaaa
gcaataacttcactggaagaaaaggttttgacgatactgactgagaagggatatatcgtt
gatgaggcagcatttggaaccacagaagcacaaccggagctgttggaggatgaagatgag
gacgaggaagttgttcctgaaggtgaggtggaccaaggtgatgttcacataaggcccatc
cctaggaaacctattcctttgctattttcagaagtagatgtgaagctggtcttcaaagaa
gtatcgtcaaagctcctgaggaggcgaattgttgagggaggtaaaagaagtgatggtcga
actccggatgggatccggccaattaactctagatgtggtctgcttccaagagcacatggc
agttctcttttcacacgtggtgaaacgcaggcactggcagttgttactcttggtgataaa
cagatggcacagagaattgacaaccttgagggttctgatgaatacaagaggttttatctt
cagtacacttttcctccatcgtcagttggtgaagttggacgaattggagcaccgggtaga
agagaaataggtcatgggacactggcagaacgagcattggagactatattacctagtgat
gatgattttccttacactatacgtgttgagagtacaatacttgaaagcaatggttcttca
agcatggcatctgtttgtggcggttgcttggctttgcaagatgctggagttccagtcaaa
tgctctgttgctggcattgcaatgggaatggtttgggatacagaagaatttggcggtgat
gggtctccccttatcctttctgacatcactggagctgaagacgcatctggtgatatggac
tttaaggttgctgggaatgaggatggtgttaccgcgtttcagatggacattaaggtagga
ggaatcactttggagataatggaaaaggctctgatacaggcaaaagctgggcgtcgctat
attcttgctgaaatggcaaagtgctcgccgcctcctacgttgagtctctcaaaatacgct
ccgttgatacttattatgaaggtccatccaagcaaagtatactctcttattggttctggt
gggaagaaagtaaagagcatcattgaagaatcaggagttgaagccattgatatgcaagat
gatggaactgtcaaaattatggcaaacgatatagcgagtctggagagggcgaaagcgata
atcagtggattgacaatggttccagctgttggtgatatctataggaattgtgaaatcaaa
tcaatggctccttatggtgcctttgtagagattgcacctgggagagaaggactttgccat
gtcagtgagctaagtgctgaatggcttgccaaaccagaggatgcctataatataggagac
cgcattgatgtcaaactaatagaggtgaatgaaaaaggtcagcttcggcttagtgtacga
gctctacttccggaatcagagtcagacaaagacagccagaaacagccaccaacaactggt
gattctaccaagagttcaccaaggaagtatgtaaatccttcgttgaaggaccgtgcagct
acaggagcatctggggatgaacttgtctggaagaagaaagatgtcagtagagtatccagt
ggtgataagccaatgaaaagcagtagcaacgaagaagatagaggcagcttagtcaatgat
gaagccacaatcagctag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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