KEGG   Brassica oleracea (wild cabbage): 106328759
Entry
106328759         CDS       T04124                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIB-like
  KO
K03124  transcription initiation factor TFIIB
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106328759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106328759
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     106328759
 Prokaryotic type
  Archaeal type
    TFB
     106328759
SSDB
Motif
Pfam: TFIIB
Other DBs
NCBI-GeneID: 106328759
NCBI-ProteinID: XP_013622725
Position
C1:1388479..1389176
AA seq 177 aa
IASNVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVV
INKCFCTRRNPISIXIYLACQLEDKRKTQAEICKITGLTLRKVYKELLENWDDLLPSNYT
PAVPPEKAFSTTRSTTPRAVDPSPEPSFMDRDKPSVKPIESLDNAHQQQSKGKEDQY
NT seq 534 nt   +upstreamnt  +downstreamnt
attgcatccaatgtacagcaaaaggagattggaaagtacatcaagatcttaggagaagct
ttacagctaagccaaccaatcaacagcaactctatatcagttcatatgccaaggttctgc
actctccttcaacttaacaagtctgctcaggagctggcaacgcatattggagaagtggtg
atcaacaaatgcttctgcacgcgtagaaaccccatcagcatcnntatctatctagcttgc
cagcttgaagacaaacggaagacgcaagcggagatttgtaaaataacgggactaactcta
cgcaaagtctacaaagaactcttagagaattgggacgatcttctcccgtctaactacaca
ccagccgtcccaccggagaaagcattctccacaacacgttcgacaactcctagagccgtg
gatccatcgcctgaaccgagtttcatggacagagacaagccatcggttaaacccattgaa
agtttagataatgcacaccagcaacagtccaaaggcaaagaagatcagtattag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (6)   

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