KEGG   Brassica oleracea (wild cabbage): 106332145
Entry
106332145         CDS       T04124                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00900  Terpenoid backbone biosynthesis
boe01100  Metabolic pathways
boe01110  Biosynthesis of secondary metabolites
Module
boe_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    106332145
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:boe01006]
    106332145
Enzymes [BR:boe01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     106332145
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     106332145
    2.5.1.29  geranylgeranyl diphosphate synthase
     106332145
Prenyltransferases [BR:boe01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   106332145
SSDB
Motif
Pfam: polyprenyl_synt UbiA
Other DBs
NCBI-GeneID: 106332145
NCBI-ProteinID: XP_013626067
Position
C3:complement(55114163..55115682)
AA seq 294 aa
MSYIVSKAESVNRALDLVVPLQEPVKIHEDMRYSLLARGKRIRPLLCIAACELVGGEASV
AMPAACAVEMLHTMSFIHDDLPCIDNDDLRRGKSTNHKVFGENVALLAGDALLPFAFEHL
VSATSPVVSRVRLVRTVGELAKAVGVEGVAAGQVADISSEGLDPNDVGLEHLEFIHLHKT
AALLEASAVLGGIVGGGSDDETERLRQFARCVGLLFQVVEDILDVTISSQELGKTAGKDL
VADKLTYPKIMGLEKSREFAEKLSRDAREQLLGFGSDQVAPLLALANYIANRQN
NT seq 885 nt   +upstreamnt  +downstreamnt
atgtcttacatagtcagtaaagccgagtccgtcaacagagccttggacttggtcgttcct
ctccaagaaccagtcaagatccacgaagacatgcgctactctctcctcgccagaggcaaa
cggatcaggccccttctctgcatcgccgcttgcgagctcgtcggaggagaagcatccgtc
gctatgccggcagcttgcgccgtcgaaatgctccacaccatgtccttcatccacgacgat
ctcccgtgcatcgataacgacgatctccgccgcgggaaatccacgaaccacaaagtcttc
ggcgaaaacgtcgcccttttggccggagacgcgcttcttccctttgccttcgagcattta
gtgtcggcgacgagtcccgtggtttctcgggtgagactggttcgaaccgtgggagaattg
gctaaagccgttggcgttgaaggcgtcgcggctggacaagtggcggatataagcagcgaa
gggttggacccaaacgacgtcggtttggaacatttggagtttatccatttgcataaaacg
gcggcgttgcttgaagcctctgcggtgttgggtgggatcgttggaggagggagtgacgat
gagaccgagaggctgaggcaattcgcgaggtgtgttggtttgttgtttcaggtggttgag
gatatcttggacgtcacgatatcgtctcaagaattaggtaaaactgctgggaaagatttg
gttgctgataagctgacgtatccgaagattatggggttggagaaatcgagagagttcgct
gagaagttgagtagagatgctcgtgaacagcttttagggtttggttccgaccaggtggct
cctttgttggctttggctaattacattgccaatagacagaactga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

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