KEGG   Bipolaris oryzae: COCMIDRAFT_93711
Entry
COCMIDRAFT_93711  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
bor  Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:bor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bor03041]
    COCMIDRAFT_93711
Spliceosome [BR:bor03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    COCMIDRAFT_93711
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    COCMIDRAFT_93711
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 19128314
NCBI-ProteinID: XP_007687365
JGI: Cocmi1_93711
UniProt: W6ZF40
Position
Unknown
AA seq 689 aa
MEVASAVRLPSPSPEPEVDAQDVPRKRERSPYDGPSAGPSKRSRRDEEDDHRNGEASHRP
APKPTTDDLPEDDSRLKLFQNAFSANRKLPIDDSKTRAGGAYIPPARLREMQKSITDKKS
AEFQRMAWEALKKSIQGLINKTNTANIKMIVPELFSENLVRGRGLFCRAIMKAQAASLPF
TPIYATMVAIVNTKLPQVGDLLVRRLIVQFRKGFRRNDKAVALSSTMFLSHLVNTQVVHE
ILIAEILLLLLNKPSDDSVEIAVGIMKEVGAFLDEMKPAIANAIFDQMRNILHEADIDKR
TQYMIEVLFEVRRTKYKDNPVVREELDLIEEEDQITHNHTLEGDLKVEDGLNIFKFDPDY
EAHEEEYAKIKAEILGEEEGSDDDGYTDASSEDEEDEEIKAMDVKDQTNADLVNLRRTIY
LTIKSSGGFEECVHKLMRINLPQGLENELTTMIVECASQERTYEKFYGMIGERFCKLNRM
WTDLFEEAFAHYYETIHRFETNRLRIIAQFFAHLLASDGIGWHVFQVVKMTEEDTTSSSR
IFVKILFEELLASLGQKAVVERFKDPMLQDSLTGIFPTDADDQSKTRFSINFFTAIGMGV
LTEGMRDWLKNSAPKPKPLPEPESDSEDDRSVSSRSSYTSSSYSRSRSPPFRLAVSLPTP
APSKIFLVSFAIAISTTKTQTRFKQPTAI
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggaggtcgcatctgccgtccgactgccttcgccttcgccagagcccgaggtcgatgcg
caagatgttccgcgcaaacgcgagcgctcgccgtacgatggaccgagtgctgggccatcc
aagagaagtcggagagatgaggaggatgaccatcgcaacggagaagctagccatcgccca
gcgccgaagcctaccaccgacgacctacccgaggacgactcgcgattgaagctcttccag
aatgccttcagcgcgaaccggaagctgccgattgacgactccaagacacgtgctggaggc
gcgtacatcccacccgctcgcctgcgcgagatgcaaaagtcgattacggacaagaagagt
gcagagttccagcgcatggcttgggaggcgctcaagaagtcgatccagggtctaatcaac
aagacgaataccgccaatatcaagatgattgtgcctgagctgttttccgagaacctggtg
cgtggacgaggcctgttctgcagagccatcatgaaggcgcaggctgccagtttgcctttt
actccgatttacgcaactatggtggccattgtgaacaccaaactacctcaggtcggcgat
ttgctagttcgccgtttgatcgtacagttcaggaagggattcaggaggaatgacaaggcc
gttgcgctgtcgagtaccatgttcctttcccacctcgtcaatacccaggtcgtccatgaa
atcctcattgcggaaatcctcctgctcctgctcaacaagccttctgacgattctgttgaa
attgctgtcggcatcatgaaagaggtcggcgctttcctcgacgagatgaaacctgccatc
gccaatgccatttttgaccagatgcgcaacatcctccacgaagccgacatcgataagcgc
acacaatacatgatcgaggtgctttttgaagttcggcgcacaaagtacaaggacaaccca
gttgtgagggaagagttggaccttattgaggaggaggaccaaattactcacaaccatacg
cttgagggtgacttgaaggttgaggatggcttgaacattttcaagtttgatcctgattac
gaagcccatgaggaggagtatgcaaagatcaaggcagaaattctgggtgaagaagagggc
agtgacgatgatggatacacggatgcgtcgtccgaggatgaggaagatgaggagatcaag
gctatggacgtcaaggatcagactaacgcggatcttgtcaacttgcgccgaacaatctac
ctaaccatcaagagcagtggtggattcgaagagtgtgtacacaagctgatgcgaatcaac
ttgccacagggtctggagaatgagctcactaccatgattgtagagtgcgctagccaggag
aggacgtacgagaagttctacggtatgatcggagagcggttctgcaagctgaatcggatg
tggacagacctgttcgaggaagcgtttgcgcactactacgagaccattcaccgttttgag
acgaaccgcctgcgcatcatcgcccagttcttcgcccatttgctagcatccgacggtatc
ggctggcacgtcttccaagtagtgaagatgacggaagaggacacgacttctagttctcgt
atctttgtcaagattcttttcgaggagcttcttgcctctcttggccagaaggcagtggtt
gagcgcttcaaggaccccatgcttcaggacagcctcactggcatcttccccacagatgcg
gacgaccagagcaagacacgcttctccatcaacttcttcactgctattggtatgggtgtg
cttactgagggtatgcgtgactggcttaagaacagtgcgcccaagccaaagccacttccc
gagccagagagtgattcagaggacgatcgcagtgtttcatcgcggtcaagctacacctcg
agtagctactctcgatcacgaagccctcccttcaggctcgccgtctcgctccccaccccc
gcgccgtcgaagatattcctcgtctccttcgcgatcgccatctccaccaccaagacgcag
acgcgattcaagcagcccaccgccatctaa

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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