KEGG   Bradyrhizobium ontarionense: LQG66_05485
Entry
LQG66_05485       CDS       T10106                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
boy  Bradyrhizobium ontarionense
Pathway
boy02024  Quorum sensing
boy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LQG66_05485 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LQG66_05485 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boy03019]
    LQG66_05485 (hfq)
   03036 Chromosome and associated proteins [BR:boy03036]
    LQG66_05485 (hfq)
Messenger RNA biogenesis [BR:boy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LQG66_05485 (hfq)
Chromosome and associated proteins [BR:boy03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LQG66_05485 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: UFZ05766
Position
complement(1226530..1226778)
AA seq 82 aa
MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDASA
NT seq 249 nt   +upstreamnt  +downstreamnt
atggcggcagaccgcgcacaaaacctacaagacacttttctcaaccatgtccgcaaaacc
aagacgccgctcacgatctttctggtcaatggcgtgaaattgcaggggattgtcacatgg
ttcgacaatttctgcctgctgctccggcgcgacggtcactcgcagctcgtctacaagcat
gcgatctccaccatcatgccgggcgccccgatccagctgttcgagggtggcgaggacgcc
tctgcgtga

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