KEGG   Bradyrhizobium sp. CCGE-LA001: BCCGELA001_18300
Entry
BCCGELA001_18300  CDS       T04273                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
brc  Bradyrhizobium sp. CCGE-LA001
Pathway
brc03410  Base excision repair
brc03430  Mismatch repair
brc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BCCGELA001_18300
   03430 Mismatch repair
    BCCGELA001_18300
   03440 Homologous recombination
    BCCGELA001_18300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brc03400]
    BCCGELA001_18300
DNA repair and recombination proteins [BR:brc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BCCGELA001_18300
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BCCGELA001_18300
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BCCGELA001_18300
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AMA58035
UniProt: A0A0X8CIF8
Position
3975911..3977752
AA seq 613 aa
MTPSATALPVEAPQAFLGVARSLTDKLWRDRLDGRGAAKALAIVQRHQLPELLARVLAGR
GVDIDTVPDFLDPTIRKLLPDPFTVTEMEAAARRIADAASKGEKVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNTEAVRALAAKGATLLITVDCGTTSIEPLAESK
RLGMSVVVIDHHQCGLDLPEVDALVNPNRSDDLSGLGHLAAVGLVLVTLVAVNRELRQRG
FWSSEMPEPDLLGMLHHVALGTVADVAPLIGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRVNAGGRIGRADLGVRLLLEGDSVEAARIAAELDRLNSERRVIE
QAAEAQAEAEALASIGLEDKLGVIVTASEGWHPGVVGLVASRLKEKFSRPAFAIALEPGG
IGTGSGRSIAGVDLGKAVRQAVADGILLKGGGHAMAAGVTLRKEKLAEFRAYMEQALARD
VAEARHVNELYVDGAVSARAVTPELATTLNRAGPFGSGNPEPVLALPAHQLVYADEVGQA
HLRLRFKSGDGAIVNGIAFRSVGQKLGNALLANRGQQLHVAGSLSVDRYQGVERVQFRVV
DIALPDQGPSVIR
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgacgccctccgccaccgcattgcctgtcgaagcgccccaggcgttcctgggggtggca
cgctcgctcaccgacaagctgtggcgtgaccggctggacgggcgcggagcggccaaggcg
ctcgccatcgtgcagcggcaccaattgccggaactgctggcgcgggtgcttgcgggccgc
ggcgtcgatatcgacaccgtgccggactttctcgatccgaccatccggaagctgctgccg
gatccgttcacggtgacggagatggaggccgctgcccggcgaatcgcggatgccgccagc
aagggcgagaaggttgcgatcttcggcgattacgacgtcgacggcgcgacgtcggcggcg
ctgctcgcctggcatctgcgccattgcggcctcgatccgctgatccacatcccggaccgg
atcttcgagggttacggccccaacaccgaggctgtgcgcgcgctggcggcgaagggcgcc
acgctgctgatcaccgtcgattgcggcaccaccagcatcgagccgctggccgagtccaag
cggctcggcatgtccgtggtcgtgatcgaccaccaccaatgcggcctcgatctccccgag
gtcgatgcgctggtcaatccgaaccgctccgacgatctctccggcctcggccatctcgcc
gccgtcggcctcgtgctggtgacgctggttgccgtcaaccgcgagctgcgccagcgcggc
ttctggagcagcgagatgcccgagccggatctgctcggcatgctgcaccacgtcgcgctc
ggcaccgtcgccgatgtcgccccgttgatcggtctcaaccgcgccttcgtcgccaagggc
ctgatcgcgatgcggcggcgagaccatgtcggccataccgcgctgatggacgtggcgcgg
ctcaacggcccgccggaggcttggcatctcggcttcatgctggggccgcgcgttaatgct
ggcggccgtatcggccgcgccgatctcggcgtgcggctgctgctcgagggcgacagcgtc
gaggcggcgcggatcgccgccgagctcgaccgcctcaacagcgagcgccgcgtcatcgag
caggcggcggaagcccaggccgaagccgaggcgcttgcctcgatcgggctcgaggacaag
ctcggcgtcatcgtcacggcctccgagggctggcatcccggcgtggtcggcctcgtcgcc
tcccgcctaaaggagaagttttcgcggccggcttttgccatcgcgctggagcctggcggc
atcggcaccggatcgggccgctcgattgccggcgtcgatctcggcaaggcggtgcggcag
gcggtcgccgacggcatcctgctcaaaggcggcggccacgcgatggccgcgggcgtgaca
ttgcggaaagagaagctcgctgaattccgcgcctatatggagcaggcactggcacgcgac
gtcgcggaagcccgccacgtcaacgagctctatgtcgatggcgcggtttctgcgcgcgcc
gtgacgccggagcttgcgaccacccttaaccgcgccggtccgttcggcagcggcaatccc
gagccggtgctggccttgccggcgcatcagctcgtctatgctgacgaggtcgggcaggcg
catctgcgcctgcgcttcaagtcgggcgatggcgccatcgtcaacggcattgccttccgc
tccgtcggccagaagctcggcaatgcgctgctggccaatcgcggtcagcaattgcatgtc
gcgggatcgttgtcggtcgatcgctaccagggcgtcgagcgtgtacaatttcgtgtcgtc
gacatcgcgctaccggaccaggggccatccgtgattagataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (6)   

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