KEGG   Brassica rapa (field mustard): 103828358
Entry
103828358         CDS       T03449                                 
Name
(RefSeq) WD repeat-containing protein 75
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103828358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brp03009]
    103828358
Ribosome biogenesis [BR:brp03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103828358
SSDB
Motif
Pfam: Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 103828358
NCBI-ProteinID: XP_009102213
Position
A07:1370000..1374102
AA seq 800 aa
MIRGGRSHLTSPPSFSNDAKKLLVCTGNTVSVFSAATGLQITSLEGHTAPVTTLLVVPAS
TAAQKILSYCWTASLDGMIRYWDFSGPELLKTVDAKVPIYSMVIPSLLSEPQQVDSSKLV
AYVSVEDASLVKEGSKELRGHIRRFDLAKERLSRGDTLKETEEPKSIVISPSGEFFGIRH
KCKIHVWGVPSGGGSRNAVAKKMTLHHTKVINAFAFHPTERIIAAGDVTGRVLIWRGFGN
RKLALGSQKKSVRSVVDLDNPGVRDGDDAESCTTWHWHSAEVNVLNFSSDGAYLYSGGRE
GVLVVWQLDTGKKKFLPRIGSPLLYFIWSPEPTLSSVVCADNQIHLLKMPSMEISRTISG
IKPPPSLPKMYEGLSSTVAFDRSSGIAALCTENYCVQLYNLLNDRGISEVQVCERNHQPG
DEITVVVTAVALSLDGSVMSTTEVKLPEDGIGGLVSLKFWESEPDNKTFTLSTIVYEPHK
DAGVSAIAFHPTRSMAVSTSFGGDFKIWVCNSDKSQTDKDSSWICHAVGSYKKKPMTAAA
FSGDGTVLAVAAENVITLWNPNKNILLSVLGATLTPITKLSFVGKSEFLVAASNFPKPEL
SVWNTSKLSLSWSYELRIEAVTSAVDSSTFAVLALVPKSFRKSKSKKNIFRGRDGAILLF
NGSDPKPVSIWTVMKAQGGSISFLEGDKSQLRLAYVNGSHEYVVFDPNSDDTHERSAIDY
EGLVGDEETGDFGYTSLYGQLPDYDKKRKDDAESLATPFVSSERPWETIFSGSTLNFPPL
QKLCGEFFESLMEKSNSVVE
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgattcgcggcggtagaagccacctgacatcacctccttccttctccaacgacgcaaag
aagctcctcgtctgcacaggaaacaccgtctccgttttcagcgccgccactggcttacag
attacttcccttgaaggtcacacagctccagtcacgactcttcttgtcgtccctgcctcg
accgctgctcagaagatcctctcttactgctggaccgcgtctctagacggtatgattcgt
tactgggacttctcaggacctgagcttctgaaaaccgttgatgccaaagttcccatttac
tctatggtcattccttctctattgagtgagcctcaacaagtagattctagtaagttagtt
gcttatgtttctgttgaggatgcgagtctggttaaagaagggtccaaggagctgcgtgga
cacattcgaaggtttgacctagctaaggagcgtctttctcgtggagatactttgaaagag
acggaagagccaaagtctatagttatctctccctctggggagtttttcggaatccgccac
aagtgcaaaatccatgtatggggtgttccttctggaggagggtcaaggaacgcagttgcc
aagaagatgacgttgcatcacactaaggttatcaatgcttttgcctttcatcccacggag
aggatcatagccgctggagatgtgactggaagagtgttgatttggagaggcttcggtaat
agaaagcttgcattgggtagtcagaagaagagtgtgagatcagtggttgatttggacaac
cctggggtgagagatggggatgatgctgagtcttgcaccacgtggcattggcactctgct
gaagttaatgtccttaacttctcttccgatggagcatacttgtattcagggggaagggaa
ggggtgcttgttgtttggcagctggacacggggaagaagaagttcttaccaaggataggg
tctcccttgttgtacttcatttggtctccagaaccaactctttcttccgttgtttgtgca
gataaccagatccatttgcttaaaatgccttccatggagatctcaaggaccatttctgga
atcaagcctcccccatcattgcctaagatgtacgaaggcttgtctagtactgttgctttt
gatagatcttctggcatagctgcgttgtgcacagagaactattgtgttcagctatacaat
ctccttaatgaccgtggaatttcagaggttcaagtttgtgagagaaaccatcaaccaggt
gatgaaatcacagttgtggtgacagctgttgctctctccctggatgggtcagtgatgagt
acaaccgaagtgaaacttccggaagatggcataggaggcttagtgtccctcaagttttgg
gagtctgaaccagacaacaaaactttcaccttatccacaatcgtatacgaacctcacaag
gatgctggtgtctcagccattgccttccaccctacccgttccatggcagttagtacatcc
tttggtggtgacttcaagatttgggtttgcaacagcgacaagagccagacggataaggac
tctagctggatatgtcatgcagttggctcttacaagaagaagccaatgactgctgctgct
ttctctggggatggcactgttctggctgttgcggctgagaatgttattacgctttggaat
ccgaacaagaacattctcttgtctgtcttaggagccactcttacgccaatcacaaagctc
agtttcgttgggaagtctgagttccttgttgctgcatcaaattttccaaaacctgaacta
tctgtttggaatacatcaaagctgtctttatcatggtcttatgagttacgcatagaagct
gtcacttctgcagtggattcgtccacttttgctgtcttggctctggtcccaaaatctttc
agaaagagtaaatctaagaagaatatcttccgcggtagagatggtgccattctcttgttt
aacggatcagatcctaagcctgtatctatatggaccgtaatgaaggctcagggaggatca
atctcatttcttgaaggagacaagtctcagcttcgtcttgcatatgtaaatggaagccat
gagtatgttgtgttcgaccccaacagtgatgacacacatgagcgcagcgctatcgactac
gagggtcttgttggtgacgaagagacaggagattttggatacacatcgctgtacggacag
ttaccagactatgacaagaagagaaaggatgatgctgagtcgttggcgacaccgtttgta
tcgtcagagagaccgtgggaaactatattcagcggttcaacactaaacttcccgcctctt
cagaagttatgtggtgagttctttgagtcactaatggagaaaagtaactctgttgtggag
tga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (20)   

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