KEGG   Brassica rapa (field mustard): 103850374
Entry
103850374         CDS       T03449                                 
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103850374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103850374
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     103850374
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     103850374
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DNA_pol_B_palm
Other DBs
NCBI-GeneID: 103850374
NCBI-ProteinID: XP_009125368
Position
A01:complement(2483372..2488205)
AA seq 767 aa
MMVGTQSVNSPKSYGITKPLSLAGPSAADFKRNLELEKFLVDEGLYESEEDTMRREEVLG
RIDQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNR
EEDFFMILHDMLAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISRLVVPQDLDIS
NSSVLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKRRGVYSNVTGFLG
GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKN
HRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQY
MFFEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDA
SREFLHCAFFMGLQRAEGVGGQECQQFDIRGTVEEFRQEVNMYMFWKPGMDVYVSHVRRR
QLPSFVFPVGYRRPRPSRHQNQPGGRTGEDGTVSNSAVERHVKRKNDNEMMDARPEKPEK
RASLSPHSLDIVSPDNSAITTGCTPPLCNLRRSPGEGIEAANLNTDSPELANLARDECNS
GSEQALEVDSMALVQECSDPAEAFGKCVTPDSSDVVATESCQEENLDRDLRSVSISVVDE
VERESKSHGGTRITGEIAESVQLGRSCGQNRDYEGFEFAATKPDPFVGKGNLFSQSGIPE
DLQSNSLVSGMEKAEDGARSDSLQKSQIRQNHDVFILLFFFGFVVLL
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgatggtgggtactcaatcggtgaattcccctaagagctatgggatcacgaagcctctc
tcgcttgctggcccttccgcggctgattttaagcgtaacctcgagcttgagaagtttttg
gttgacgagggactatatgagagcgaggaggatactatgcggagagaggaggttctcggg
cgcattgatcagattgtgaagcactgggtgaagcagttaactcagcaaagaggctatacg
gaccaaatggtggaggatgcaaatgctgtcatttttacctttggttcttaccgacttgga
gtgcatgggcctggggctgacattgacactctgtgtgttgggccatcttatgttaaccgg
gaggaggatttctttatgatcttgcatgatatgctggctgaaatggaagaagtgactgaa
cttcaacctgttcccgacgctcatgttccggtcatgaaatttaagtttcaaggaatatcg
attgatcttctctatgctagcatatctcgtttagttgtgccacaggatctcgatatatcc
aactcttctgtgctgtgtgatgttgatgagccaaccgtcaggagtcttaatggttgtaga
gttgctgatcagattcttaaactcgttccaaattttgagcactttcgtacaacattaaga
tgcctgaagtactgggcaaagaggcgtggagtatattcaaatgtgactggatttctgggc
ggtgtaaactgggcacttttggtagctcgtgtgtgccagctctatccaaatgcgattcct
agtatgcttgtttctcggtttttcagagtatatactcagtggcggtggccaaacccggtt
atgctttgtgctattgaagaggatgagcttgggttccctgtctgggaccctcgcaagaac
catcgcgatcgctatcaccttatgccaataatcactccagcttacccatgcatgaattct
agctacaatgtttctcaaagcactcttcgcgttatgacagagcagttccagtttggtaac
aatatcttgcaagagatcgaattaaataaacaacactggagctctttgtttgaacagtat
atgttcttcgaagcatataaaaactacctgcaagttgatatagtagcagcagatgcagag
gatttattggcttggaagggttgggttgagtcacggttcaggcagctgaccttaaagata
gaaagagatacaaacggaatgttaatgtgccatccccaaccaaatgagtatgtcgacgcg
tctagggagtttctgcattgtgcctttttcatgggcttgcaaagggcagagggagttggt
ggtcaagagtgtcagcagtttgatatccgtggtacggtcgaggagttcagacaagaagta
aacatgtatatgttctggaagcctgggatggatgtgtatgtttctcatgtgcgtagacga
cagcttccatcttttgttttcccagttggttacagaaggccacggccttctaggcaccag
aatcaaccgggtggaagaactggtgaagatggtacagtttccaattctgcggtggagagg
catgtgaagagaaagaacgacaatgaaatgatggatgctcggccagaaaaacctgagaag
cgcgcatctcttagtccacacagtttagacattgtttctcctgacaatagtgctatcact
actggttgtacccctcctttatgtaaccttagaaggtcacctggtgagggaattgaggct
gcaaatttgaacactgatagtcctgaactcgcaaaccttgctcgagatgagtgtaactct
ggcagcgagcaagctctggaagtagatagtatggctcttgttcaggaatgctctgatcca
gctgaggcttttggaaagtgtgtgacacctgattctagtgatgtggtagcaactgaaagt
tgtcaggaagagaacttagatcgtgatttgaggtctgtatcgatcagtgttgtcgatgaa
gtcgagagggaatcaaagtcacatggtggtacgcggataactggggagattgcggagagt
gttcagctgggtagatcttgcgggcagaaccgtgattacgaaggattcgagtttgctgct
acaaaaccagatccttttgtgggaaagggaaacttgttctctcaaagtggcataccagaa
gaccttcagtcaaactctttggtcagcgggatggagaaggcagaagacggagctaggtca
gactctttgcagaagtcacagataaggcaaaatcatgatgtctttatattattgtttttt
tttggtttcgtggtgcttttatag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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